CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11335	Soybean	extracellular	40.62	41.94
KRH51169	Soybean	cytosol	25.0	30.38
KRH20946	Soybean	cytosol	59.38	16.81
Bra002195.1-P	Field mustard	cytosol	52.08	14.49
CDX92571	Canola	cytosol	52.08	14.49
CDY13930	Canola	cytosol	51.04	14.2
AT5G18940.1	Thale cress	cytosol	51.04	14.2
GSMUA_Achr5P27410_001	Banana	cytosol	40.62	13.45
Solyc01g080350.2.1	Tomato	plastid	46.88	13.24
PGSC0003DMT400033238	Potato	cytosol	46.88	13.12
VIT_05s0020g02410.t01	Wine grape	cytosol	45.83	12.75
HORVU2Hr1G024780.11	Barley	cytosol	38.54	11.86
GSMUA_Achr11P...	Banana	cytosol	40.62	11.85
EER97658	Sorghum	mitochondrion	39.58	11.31
TraesCS2D01G142500.1	Wheat	mitochondrion	39.58	11.31
TraesCS2B01G163800.1	Wheat	mitochondrion	39.58	11.31
TraesCS2A01G139800.1	Wheat	mitochondrion	39.58	11.31
TraesCS3B01G378800.1	Wheat	cytosol	35.42	10.66
KRH01988	Soybean	endoplasmic reticulum, extracellular	36.46	10.51
KRH74028	Soybean	cytosol	38.54	10.48
Os07t0647100-01	Rice	mitochondrion	36.46	10.39
Os03t0359700-01	Rice	plasma membrane	35.42	10.12
Zm00001d007058_P002	Maize	mitochondrion	39.58	10.05
TraesCS3D01G340700.1	Wheat	cytosol	33.33	10.03
KRH14096	Soybean	cytosol	36.46	9.92
TraesCS3A01G347100.1	Wheat	cytosol	32.29	9.72
EER92235	Sorghum	mitochondrion	33.33	9.64
KRH11537	Soybean	cytosol	33.33	9.58
KRH36554	Soybean	cytosol	33.33	9.55
Zm00001d029234_P016	Maize	mitochondrion	32.29	8.71
HORVU3Hr1G088310.1	Barley	cytosol	34.38	8.46

Protein Annotations

EMBL:ACUP02010147	EnsemblPlants:KRH08140	EnsemblPlantsGene:GLYMA_16G132400	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PFAM:PF08569
ProteinID:KRH08140	ProteinID:KRH08140.1	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0002966082	UniProt:K7MH38
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:28870926..28871703

Molecular Weight (calculated)

10684.0 Da

IEP (calculated)

10.481

GRAVY (calculated)

-0.296

Length

96 amino acids

Sequence
(BLAST)

1: MTATCFALLR SPSLRSTTRT TPPSLSAPMS EPSSLTPVPY SSKRPFQLSA FHIFKVFVAN PNKPREVKII LLKNQEKLLD LLHNLSPGKG SEDEQF

Best Arabidopsis Sequence Match ( AT5G18940.1 )
(BLAST)

001: MSFSFFKPSR PKTPQEVVKA IRDSLMALDT KTVVEVKALE KALEEVEKNF SSLRGILSGD GETEPNADQA VQLALEFCKE DVVSLVIHKL HILGWETRKD
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGKGSED DQFEEEKELI IEEIQKLSGL KNLER

Arabidopsis Description

At5g18940 [Source:UniProtKB/TrEMBL;Acc:Q8L9L9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.