Factsheet for GSMUA_Achr5P27410_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	84.14	74.16
HORVU2Hr1G024780.11	Barley	cytosol	71.72	66.67
EER97658	Sorghum	mitochondrion	72.07	62.2
TraesCS2D01G142500.1	Wheat	mitochondrion	71.03	61.31
TraesCS2B01G163800.1	Wheat	mitochondrion	71.03	61.31
TraesCS2A01G139800.1	Wheat	mitochondrion	70.69	61.01
Os07t0647100-01	Rice	mitochondrion	70.69	60.83
VIT_05s0020g02410.t01	Wine grape	cytosol	72.07	60.58
KRH20946	Soybean	cytosol	69.66	59.59
Os03t0359700-01	Rice	plasma membrane	68.28	58.93
TraesCS3B01G378800.1	Wheat	cytosol	64.48	58.62
Solyc01g080350.2.1	Tomato	plastid	68.62	58.53
TraesCS3D01G340700.1	Wheat	cytosol	64.14	58.31
PGSC0003DMT400033238	Potato	cytosol	68.62	58.02
EER92235	Sorghum	mitochondrion	66.21	57.83
TraesCS3A01G347100.1	Wheat	cytosol	63.45	57.68
AT5G18940.1	Thale cress	cytosol	66.21	55.65
Bra002195.1-P	Field mustard	cytosol	65.52	55.07
CDY13930	Canola	cytosol	65.52	55.07
CDX92571	Canola	cytosol	65.52	55.07
Zm00001d007058_P002	Maize	mitochondrion	70.69	54.23
GSMUA_AchrUn_...	Banana	cytosol	28.97	48.28
HORVU3Hr1G088310.1	Barley	cytosol	62.76	46.67
Zm00001d029234_P016	Maize	mitochondrion	52.07	42.42
KRH08140	Soybean	plastid	13.45	40.62
KRH11335	Soybean	extracellular	12.76	39.78
GSMUA_Achr1P22810_001	Banana	cytosol	44.83	38.69
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	14.14	25.31

Protein Annotations

EnsemblPlants:GSMUA_Achr5P27410_001	EnsemblPlants:GSMUA_Achr5T27410_001	EnsemblPlantsGene:GSMUA_Achr5G27410_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF15
PFAM:PF08569	SEG:seg	SUPFAM:SSF48371	UniParc:UPI00029679C8	UniProt:M0T266	MapMan:35.1

Description

Putative Calcium-binding protein 39-like [Source:GMGC_GENE;Acc:GSMUA_Achr5G27410_001]

Coordinates

chr5:-:27921514..27927620

Molecular Weight (calculated)

33914.3 Da

IEP (calculated)

4.995

GRAVY (calculated)

-0.034

Length

290 amino acids

Sequence
(BLAST)

001: MLSGDAETEP NQDHISQLVV EICKGDVLAL FIHKLPTLSW EARKDLMHCW SILLRHNVDS RYCCVEYIEN HLELLDFLII CYNNKEIALS CGNMLRECIK
101: YPTLAKCILE SRSFELFFKY VELPTFDIAS DSLATFKDLL TKQEMIVSQF LSSHYVQFFE LYEKLLTSPN YVTRRQSLKI LSDFLLEPQN LQIMKRYILE
201: VRFLHIMMAL LKDTSKNIQI SAFHIFKVFV ANPNKPREII EVLIDNHDEL LMSLQNLPMS KGEDDQFEEE KDLIIKEIEE LCNLSKATTS

Best Arabidopsis Sequence Match ( AT5G18940.1 )
(BLAST)

001: MSFSFFKPSR PKTPQEVVKA IRDSLMALDT KTVVEVKALE KALEEVEKNF SSLRGILSGD GETEPNADQA VQLALEFCKE DVVSLVIHKL HILGWETRKD
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGKGSED DQFEEEKELI IEEIQKLSGL KNLER

Arabidopsis Description

At5g18940 [Source:UniProtKB/TrEMBL;Acc:Q8L9L9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.