Factsheet for GSMUA_AchrUn_randomP08030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
plasma membrane 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51169	Soybean	cytosol	31.61	69.62
CDY42976	Canola	cytosol	62.07	63.16
GSMUA_Achr1P22810_001	Banana	cytosol	84.48	43.75
Zm00001d021954_P003	Maize	plasma membrane	83.91	43.45
OQU90170	Sorghum	cytosol	83.91	43.45
Zm00001d006710_P004	Maize	mitochondrion	83.33	43.15
Os07t0585100-01	Rice	plasma membrane	82.76	42.86
TraesCS2D01G197000.1	Wheat	golgi	82.76	42.73
TraesCS2B01G216100.1	Wheat	cytosol	82.76	42.73
HORVU2Hr1G036030.1	Barley	cytosol	82.18	42.43
TraesCS2A01G191000.1	Wheat	cytosol	82.18	42.43
PGSC0003DMT400034558	Potato	cytosol	82.76	42.35
Solyc11g012400.1.1	Tomato	cytosol	82.76	42.35
VIT_10s0405g00020.t01	Wine grape	cytosol	82.18	42.06
KRH11537	Soybean	cytosol	79.89	41.62
KRH36554	Soybean	cytosol	79.31	41.19
Solyc05g054130.2.1	Tomato	cytosol	79.89	40.76
PGSC0003DMT400021798	Potato	cytosol	79.31	40.47
KRH01988	Soybean	endoplasmic reticulum, extracellular	77.01	40.24
CDY40559	Canola	cytosol	78.74	39.94
CDY28923	Canola	cytosol, mitochondrion	78.16	39.65
Bra022139.1-P	Field mustard	cytosol	78.16	39.65
CDY17728	Canola	cytosol, mitochondrion	75.86	39.52
Bra024936.1-P	Field mustard	cytosol, mitochondrion	75.86	39.52
AT5G47540.1	Thale cress	cytosol	77.01	39.07
Bra012670.1-P	Field mustard	cytosol	75.86	38.94
CDX90480	Canola	cytosol	75.86	38.94
CDY09635	Canola	cytosol, mitochondrion	75.86	38.94
AT4G17270.1	Thale cress	mitochondrion	76.44	38.78
CDX77775	Canola	cytosol, mitochondrion	75.29	38.53
VIT_12s0057g00410.t01	Wine grape	cytosol	77.01	38.07
VIT_19s0090g01550.t01	Wine grape	mitochondrion	70.11	36.31
KRH14096	Soybean	cytosol	72.99	35.98
KRH74028	Soybean	cytosol	72.41	35.69
Os03t0172200-01	Rice	plasma membrane	71.26	34.64
CDY25960	Canola	cytosol	72.99	34.14
Bra017480.1-P	Field mustard	cytosol	72.99	32.9
CDY41055	Canola	mitochondrion	72.41	32.56
OQU85419	Sorghum	cytosol	67.82	32.15
PGSC0003DMT400057131	Potato	plastid	75.29	31.87
Solyc07g065130.2.1	Tomato	plastid	74.71	31.63
Bra026241.1-P	Field mustard	mitochondrion	48.85	30.58
Zm00001d027862_P002	Maize	plastid	64.37	30.35
TraesCS4A01G015400.2	Wheat	plastid	63.79	30.16
TraesCS4D01G287400.4	Wheat	plastid	63.22	29.89
TraesCS4B01G288500.2	Wheat	plastid	62.64	29.62
GSMUA_Achr5P27410_001	Banana	cytosol	48.28	28.97
KXG40077	Sorghum	plastid	68.39	27.23
GSMUA_Achr11P...	Banana	cytosol	49.43	26.14
CDY42975	Canola	mitochondrion	2.87	2.81
Bra014431.1-P	Field mustard	cytosol	0.57	0.72
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP08030_001	EnsemblPlants:GSMUA_AchrUn_randomT08030_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG08030_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	ncoils:Coil	PANTHER:PTHR10182
PANTHER:PTHR10182:SF12	PFAM:PF08569	SEG:seg	SUPFAM:SSF48371	UniParc:UPI000295A7DC	UniProt:M0U7B4
MapMan:35.1	:	:	:	:	:

Description

Putative MO25-like protein At5g47540 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08030_001]

Coordinates

chrchrUn_random:+:33987488..34000652

Molecular Weight (calculated)

20327.6 Da

IEP (calculated)

9.797

GRAVY (calculated)

-0.355

Length

174 amino acids

Sequence
(BLAST)

001: MKKFFDYIQL PNFDIASDAS ATFKELLTRH KSTVAEFLAK NYDWFFTEFN SRLLSSPNYI TRRQAIKLLG DMLLDRSNSA VMIRYVSSKD NLMILMNLLR
101: ESSKNIQIEA FHVFKLFAAN QNKPPEITSI LVTNKDKLLR FLKDFKIEKE DEQFEADKAQ VVKEIQALKK ENTS

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.