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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400034558 Potato cytosol 98.82 98.82
VIT_10s0405g00020.t01 Wine grape cytosol 87.35 87.35
Solyc05g054130.2.1 Tomato cytosol 87.06 86.8
GSMUA_AchrUn_... Banana cytosol 42.35 82.76
KRH11537 Soybean cytosol 81.18 82.63
KRH36554 Soybean cytosol 80.88 82.09
AT5G47540.1 Thale cress cytosol 81.47 80.76
CDY40559 Canola cytosol 81.18 80.47
Bra022139.1-P Field mustard cytosol 80.88 80.17
CDY28923 Canola cytosol, mitochondrion 80.88 80.17
Bra024936.1-P Field mustard cytosol, mitochondrion 77.94 79.34
CDY17728 Canola cytosol, mitochondrion 77.65 79.04
KRH01988 Soybean endoplasmic reticulum, extracellular 77.06 78.68
CDX77775 Canola cytosol, mitochondrion 78.24 78.24
AT4G17270.1 Thale cress mitochondrion 78.53 77.84
HORVU2Hr1G036030.1 Barley cytosol 77.06 77.74
Zm00001d021954_P003 Maize plasma membrane 76.76 77.68
TraesCS2B01G216100.1 Wheat cytosol 76.76 77.45
TraesCS2D01G197000.1 Wheat golgi 76.76 77.45
KRH51169 Soybean cytosol 17.94 77.22
TraesCS2A01G191000.1 Wheat cytosol 76.18 76.85
Os07t0585100-01 Rice plasma membrane 75.88 76.79
GSMUA_Achr1P22810_001 Banana cytosol 75.29 76.19
Zm00001d006710_P004 Maize mitochondrion 75.29 76.19
CDY09635 Canola cytosol, mitochondrion 75.88 76.11
CDX90480 Canola cytosol 75.88 76.11
Bra012670.1-P Field mustard cytosol 75.88 76.11
GSMUA_AchrUn_... Banana cytosol, mitochondrion 34.71 72.84
CDY42976 Canola cytosol 35.29 70.18
Bra026241.1-P Field mustard mitochondrion 55.88 68.35
Bra014431.1-P Field mustard cytosol 27.65 68.12
CDY25960 Canola cytosol 74.12 67.74
Bra017480.1-P Field mustard cytosol 74.12 65.28
CDY41055 Canola mitochondrion 73.82 64.86
Os03t0172200-01 Rice plasma membrane 62.65 59.5
Solyc07g065130.2.1 Tomato plastid 71.47 59.12
CDY42975 Canola mitochondrion 30.88 58.99
Zm00001d027862_P002 Maize plastid 58.24 53.66
TraesCS4A01G015400.2 Wheat plastid 56.76 52.45
TraesCS4D01G287400.4 Wheat plastid 55.88 51.63
TraesCS4B01G288500.2 Wheat plastid 55.59 51.36
Solyc01g080350.2.1 Tomato plastid 42.65 42.65
OQU85418 Sorghum cytosol 20.0 31.05
Protein Annotations
EnsemblPlants:Solyc11g012400.1.1EnsemblPlantsGene:Solyc11g012400.1Gene3D:1.25.10.10GO:GO:0003674GO:GO:0005488InterPro:ARM-like
InterPro:ARM-type_foldInterPro:IPR011989InterPro:Mo25PANTHER:PTHR10182PANTHER:PTHR10182:SF12PFAM:PF08569
SUPFAM:SSF48371UniParc:UPI0002769F70UniProt:K4D645MapMan:35.1::
Description
No Description!
Coordinates
chr11:+:5232807..5238814
Molecular Weight (calculated)
39482.7 Da
IEP (calculated)
8.287
GRAVY (calculated)
-0.401
Length
340 amino acids
Sequence
(BLAST)
001: MKGLFKSKPK TPVDLVRQTR ELLMYVERVN DTREGKREEK MMELSKSIRE LKITLYGSGE SEPLAEACAQ LTQEFFKENT LRLIINCLPN LNLETRKDAT
101: QVVANLQRQQ VQSRLIACDY LEANIDLMDK LILGYENTEM ALHYGAMLRE CIRHQSVARY VLESEHMKKF FDYIQLPNFD IAADAAATFK ELLTRHKSTV
201: AEFLSKNYDW FFTEYNSKLL ESSNYITRRQ AVKLLADMLL DRSNSAVMTR YVSSRDNLRI LMNLLRESSK SIQIEAFHVF KLFAANHNKP PDIVSILVAN
301: RSKLLRLFAD FKTEKEDEQF EADKAQVVKE IAALEPKENK
Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)
001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
Arabidopsis Description
At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.