CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024936.1-P	Field mustard	cytosol, mitochondrion	99.7	99.7
CDX77775	Canola	cytosol, mitochondrion	96.41	94.71
Bra014431.1-P	Field mustard	cytosol	38.92	94.2
AT5G47540.1	Thale cress	cytosol	93.71	91.25
CDY40559	Canola	cytosol	92.81	90.38
CDY28923	Canola	cytosol, mitochondrion	92.52	90.09
VIT_10s0405g00020.t01	Wine grape	cytosol	82.63	81.18
CDX90480	Canola	cytosol	81.74	80.53
KRH11537	Soybean	cytosol	80.24	80.24
KRH01988	Soybean	endoplasmic reticulum, extracellular	79.94	80.18
KRH36554	Soybean	cytosol	80.24	80.0
CDY09635	Canola	cytosol, mitochondrion	81.14	79.94
CDY25960	Canola	cytosol	88.02	79.03
CDY42976	Canola	cytosol	40.12	78.36
Solyc05g054130.2.1	Tomato	cytosol	79.94	78.3
PGSC0003DMT400034558	Potato	cytosol	79.34	77.94
Solyc11g012400.1.1	Tomato	cytosol	79.04	77.65
PGSC0003DMT400021798	Potato	cytosol	79.04	77.42
KRH51169	Soybean	cytosol	18.26	77.22
GSMUA_AchrUn_...	Banana	cytosol	39.52	75.86
CDY41055	Canola	mitochondrion	87.72	75.71
Zm00001d021954_P003	Maize	plasma membrane	75.15	74.7
TraesCS2B01G216100.1	Wheat	cytosol	74.55	73.89
TraesCS2D01G197000.1	Wheat	golgi	74.55	73.89
GSMUA_Achr1P22810_001	Banana	cytosol	73.95	73.51
Zm00001d006710_P004	Maize	mitochondrion	73.95	73.51
Os07t0585100-01	Rice	plasma membrane	73.95	73.51
HORVU2Hr1G036030.1	Barley	cytosol	73.95	73.29
TraesCS2A01G191000.1	Wheat	cytosol	73.65	73.0
CDY37193	Canola	cytosol	10.48	71.43
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	34.43	70.99
CDY42975	Canola	mitochondrion	33.83	63.48
CDY04151	Canola	cytosol	65.27	63.37
Os03t0172200-01	Rice	plasma membrane	60.18	56.15
Zm00001d027862_P002	Maize	plastid	58.08	52.57
TraesCS4A01G015400.2	Wheat	plastid	56.89	51.63
TraesCS4D01G287400.4	Wheat	plastid	56.29	51.09
TraesCS4B01G288500.2	Wheat	plastid	55.69	50.54
CDY45561	Canola	cytosol	64.97	45.78
CDX92571	Canola	cytosol	42.52	41.16
CDY13930	Canola	cytosol	42.22	40.87
OQU85418	Sorghum	cytosol	20.06	30.59

Protein Annotations

EnsemblPlants:CDY17728	EnsemblPlantsGene:GSBRNA2T00001953001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569
ProteinID:CDY17728	ProteinID:CDY17728.1	SUPFAM:SSF48371	UniParc:UPI0004EEE078	UniProt:A0A078FZG3	MapMan:35.1

Description

BnaA06g35470DBnaA06g35470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZG3]

Coordinates

chrLK032076:+:739681..742089

Molecular Weight (calculated)

38345.2 Da

IEP (calculated)

6.385

GRAVY (calculated)

-0.237

Length

334 amino acids

Sequence
(BLAST)

001: MKGLFKSKPR TPSDLVRQTR DLFLYISLPD SKVVMAELSR NIRDMKSILY GNSEAEPVAE ACAQLTQEFF REDSLRLLIT CLPKLNLETR KDATQVVANL
101: QRQQVNSKLI ASDYLEANLD LMDVLIEGFE NTDLALHYGA MFRECIRHQI VAKYVLESEH VKKFFDYIQL PNFDIAADAA ATFKELLTRH KSTVAEFLTN
201: NEDWFFADYN SKLLESSNYI TRRQAIKLLG DILLDRSNSA VMTKYVSSRD NLRILMNLLR ESSKSIQIEA FHVFKLFVAN QNKPADIVNI LVANRSKLLR
301: LLADLKPDKE DERFEADKSQ VLREIAALEP QDLA

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.