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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • plastid 2
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
 plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol 34.64 71.26
Zm00001d027862_P002 Maize plastid 68.72 66.67
OQU85419 Sorghum cytosol 67.88 66.21
VIT_10s0405g00020.t01 Wine grape cytosol 62.85 66.18
Os07t0585100-01 Rice plasma membrane 61.73 65.77
TraesCS4A01G015400.2 Wheat plastid 65.64 63.86
TraesCS4D01G287400.4 Wheat plastid 65.36 63.59
TraesCS4B01G288500.2 Wheat plastid 65.36 63.59
PGSC0003DMT400034558 Potato cytosol 59.78 62.94
KRH36554 Soybean cytosol 58.66 62.69
Solyc11g012400.1.1 Tomato cytosol 59.5 62.65
KRH11537 Soybean cytosol 58.38 62.57
GSMUA_Achr1P22810_001 Banana cytosol 58.66 62.5
CDY28923 Canola cytosol, mitochondrion 57.82 60.35
AT5G47540.1 Thale cress cytosol 57.82 60.35
Bra022139.1-P Field mustard cytosol 57.82 60.35
CDY40559 Canola cytosol 57.82 60.35
CDY17728 Canola cytosol, mitochondrion 56.15 60.18
Solyc05g054130.2.1 Tomato cytosol 57.26 60.12
Bra024936.1-P Field mustard cytosol, mitochondrion 55.87 59.88
GSMUA_AchrUn_... Banana cytosol, mitochondrion 27.09 59.88
PGSC0003DMT400021798 Potato cytosol 56.98 59.82
CDX77775 Canola cytosol, mitochondrion 56.42 59.41
KRH01988 Soybean endoplasmic reticulum, extracellular 54.75 58.86
Bra012670.1-P Field mustard cytosol 54.19 57.23
CDY09635 Canola cytosol, mitochondrion 54.19 57.23
CDX90480 Canola cytosol 54.19 57.23
VIT_19s0090g01550.t01 Wine grape mitochondrion 53.63 57.14
AT4G17270.1 Thale cress mitochondrion 54.47 56.85
CDY42976 Canola cytosol 26.82 56.14
VIT_12s0057g00410.t01 Wine grape cytosol 54.75 55.68
KXG40077 Sorghum plastid 67.6 55.38
KRH51169 Soybean cytosol 12.01 54.43
CDY25960 Canola cytosol 55.87 53.76
KRH74028 Soybean cytosol 52.51 53.26
KRH14096 Soybean cytosol 51.96 52.69
Bra026241.1-P Field mustard mitochondrion 39.94 51.44
Bra017480.1-P Field mustard cytosol 54.75 50.78
Bra014431.1-P Field mustard cytosol 19.55 50.72
CDY41055 Canola mitochondrion 54.47 50.39
PGSC0003DMT400057131 Potato plastid 54.47 47.45
Solyc07g065130.2.1 Tomato plastid 54.19 47.2
CDY42975 Canola mitochondrion 22.91 46.07
Os07t0647100-01 Rice mitochondrion 32.12 34.12
Os03t0359700-01 Rice plasma membrane 31.56 33.63
Protein Annotations
Gene3D:1.25.10.10MapMan:35.1EntrezGene:4331782ProteinID:ABF94227.1EMBL:AK069130InterPro:ARM-like
InterPro:ARM-type_foldProteinID:BAF11032.1ProteinID:BAS82544.1ProteinID:EAZ25756.1GO:GO:0003674GO:GO:0005488
InterPro:IPR011989InterPro:Mo25EnsemblPlantsGene:Os03g0172200EnsemblPlants:Os03t0172200-01PFAM:PF08569PANTHER:PTHR10182
PANTHER:PTHR10182:SF16UniProt:Q10R42SUPFAM:SSF48371UniParc:UPI0000DB44D7RefSeq:XP_015629050.1SEG:seg
Description
Mo25-like domain containing protein. (Os03t0172200-01)
Coordinates
chr3:-:3867253..3871354
Molecular Weight (calculated)
40778.9 Da
IEP (calculated)
6.320
GRAVY (calculated)
-0.231
Length
358 amino acids
Sequence
(BLAST)
001: MAGCLWPCVT GGGAAADGAG SLFRSKARGP VEVVRHAREL LAFLAENHDA CGDKRDVKRE HKMVDLAKSI GEMKSILYGN GEADPVDEAC SQLTKEFFKE
101: NTNSLHLLVV CLPYMDLETQ KDVTQVTANL LRQKVDYRMV ASDYLEENQD LLDVLMSGYD NMDIAIHYSA ILRDCIRHQV AARYVLESQH MKKFFDYIQY
201: PDFNIASDAF KTFKELLTRH RSSAAEFFSN NYDWFFPEFN SKLLSSSNYI IRRQATQLLG DILLDKSNTT AMVRYVSSKD NLIILMNLLR EQSRAIQVEA
301: FRVFKLFTCN PKKPPEIVGI LVTNKSKILR FLADFTIEKE DQQFEADKAQ VVTEISAM
Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)
001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
Arabidopsis Description
At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.