Factsheet for Solyc07g065130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057131	Potato	plastid	95.38	95.38
GSMUA_AchrUn_...	Banana	cytosol	31.63	74.71
Solyc05g054130.2.1	Tomato	cytosol	59.37	71.55
Solyc11g012400.1.1	Tomato	cytosol	59.12	71.47
VIT_19s0090g01550.t01	Wine grape	mitochondrion	55.47	67.86
TraesCS2A01G191000.1	Wheat	cytosol	55.23	67.36
Os07t0585100-01	Rice	plasma membrane	54.99	67.26
HORVU2Hr1G036030.1	Barley	cytosol	54.99	67.06
TraesCS2B01G216100.1	Wheat	cytosol	54.99	67.06
TraesCS2D01G197000.1	Wheat	golgi	54.99	67.06
GSMUA_Achr1P22810_001	Banana	cytosol	54.74	66.96
Zm00001d021954_P003	Maize	plasma membrane	54.5	66.67
Zm00001d006710_P004	Maize	mitochondrion	53.53	65.48
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	24.09	61.11
Os03t0172200-01	Rice	plasma membrane	47.2	54.19
Zm00001d027862_P002	Maize	plastid	45.5	50.68
TraesCS4A01G015400.2	Wheat	plastid	43.8	48.91
TraesCS4B01G288500.2	Wheat	plastid	43.07	48.1
TraesCS4D01G287400.4	Wheat	plastid	43.07	48.1
Solyc01g080350.2.1	Tomato	plastid	32.85	39.71
OQU85418	Sorghum	cytosol	14.84	27.85

Protein Annotations

EnsemblPlants:Solyc07g065130.2.1	EnsemblPlantsGene:Solyc07g065130.2	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	ncoils:Coil	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12
PFAM:PF08569	SUPFAM:SSF48371	UniParc:UPI000276CA40	UniProt:K4CHJ2	MapMan:35.1	:

Description

No Description!

Coordinates

chr7:-:67030656..67034017

Molecular Weight (calculated)

46839.6 Da

IEP (calculated)

8.877

GRAVY (calculated)

-0.247

Length

411 amino acids

Sequence
(BLAST)

001: MPIPATQIAG LANGINGSRQ VKPNNLKKLF TKAFRATAVK SIFKSKAKRK PPAEIVRRVR FLLEAVHSLD DNVDPSHFDK MEELDSLLHE VKAMLYGSNE
101: CEPAVDACAQ LTQEFFRENT FRLIIICLPK LNLEARKDVT RIVANLQRQP VNSRLIASDY LEANSDLMDH LVCGYDDPGL ALHYGTMLRE CIRHQVVARY
201: VLNSEHMKKF FDHMQIPEFD VAADATATFK ELMTRHKSTV AEFLSENYDW FFVEFNAKLL ESANYITRRQ AIKLLGDILL DRSNSAVMTR YVSSKDNLRI
301: LMNLLREASK NIQLDAFHVF KLFVANRNKP TDIVNIIVAN RSKLLRFFAS FRIDKEDEQF EADKAQVVKE IAELEAKGPL FSGELHKFPG TPTASGELYK
401: LPTTPLSRQV T

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.