Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014431.1-P | Field mustard | cytosol | 29.22 | 46.38 |
| OQU85419 | Sorghum | cytosol | 52.51 | 31.34 |
| CDY42975 | Canola | mitochondrion | 25.11 | 30.9 |
| KXG40077 | Sorghum | plastid | 51.6 | 25.86 |
| VIT_10s0405g00020.t01 | Wine grape | cytosol | 32.42 | 20.88 |
| Bra024936.1-P | Field mustard | cytosol, mitochondrion | 31.05 | 20.36 |
| KRH11537 | Soybean | cytosol | 31.05 | 20.36 |
| KRH36554 | Soybean | cytosol | 31.05 | 20.3 |
| PGSC0003DMT400034558 | Potato | cytosol | 31.51 | 20.29 |
| VIT_19s0090g01550.t01 | Wine grape | mitochondrion | 31.05 | 20.24 |
| AT5G47540.1 | Thale cress | cytosol | 31.51 | 20.12 |
| CDY40559 | Canola | cytosol | 31.51 | 20.12 |
| CDY28923 | Canola | cytosol, mitochondrion | 31.51 | 20.12 |
| Bra022139.1-P | Field mustard | cytosol | 31.51 | 20.12 |
| CDY17728 | Canola | cytosol, mitochondrion | 30.59 | 20.06 |
| Solyc11g012400.1.1 | Tomato | cytosol | 31.05 | 20.0 |
| CDX77775 | Canola | cytosol, mitochondrion | 31.05 | 20.0 |
| OQU90170 | Sorghum | cytosol | 30.59 | 19.94 |
| Bra012670.1-P | Field mustard | cytosol | 30.59 | 19.76 |
| CDY09635 | Canola | cytosol, mitochondrion | 30.59 | 19.76 |
| CDX90480 | Canola | cytosol | 30.59 | 19.76 |
| Bra026241.1-P | Field mustard | mitochondrion | 24.66 | 19.42 |
| Solyc05g054130.2.1 | Tomato | cytosol | 29.68 | 19.06 |
| AT4G17270.1 | Thale cress | mitochondrion | 29.68 | 18.95 |
| CDY25960 | Canola | cytosol | 31.96 | 18.82 |
| PGSC0003DMT400021798 | Potato | cytosol | 29.22 | 18.77 |
| CDY41055 | Canola | mitochondrion | 32.42 | 18.35 |
| Bra017480.1-P | Field mustard | cytosol | 31.51 | 17.88 |
| KRH74028 | Soybean | cytosol | 27.85 | 17.28 |
| KRH01988 | Soybean | endoplasmic reticulum, extracellular | 26.03 | 17.12 |
| KRH14096 | Soybean | cytosol | 27.4 | 17.0 |
| VIT_12s0057g00410.t01 | Wine grape | cytosol | 26.03 | 16.19 |
| Solyc07g065130.2.1 | Tomato | plastid | 27.85 | 14.84 |
| PGSC0003DMT400057131 | Potato | plastid | 26.94 | 14.36 |
| EER92235 | Sorghum | mitochondrion | 14.16 | 9.34 |
| EER97658 | Sorghum | mitochondrion | 14.16 | 9.23 |
| CDY42976 | Canola | cytosol | 4.11 | 5.26 |
| KRH51169 | Soybean | cytosol | 0.46 | 1.27 |
Protein Annotations
| EnsemblPlants:OQU85418 | EnsemblPlantsGene:SORBI_3004G235750 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Mo25 | PANTHER:PTHR10182 | PANTHER:PTHR10182:SF16 | PFAM:PF08569 |
| ProteinID:OQU85418 | ProteinID:OQU85418.1 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI000B8B9C47 | UniProt:A0A1Z5RNY5 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:58350167..58354012
Molecular Weight (calculated)
24018.8 Da
IEP (calculated)
6.274
GRAVY (calculated)
-0.285
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVLDDARTS PAAAVSSESG ESSARPAGQA SAILDRTDRW LLVDRDDGVP VAVRGSGGGR GWGRPPGVVP LQAQDLDLVT YVLNNKDGCA GGRRDAKLEH
101: RMLELSKGIK EMKGILYGNG ADDPCEEACK QLTKEFFKKN TDTFRQFIVC LQYVNLDTQN DVTQVIANLQ RQKVDSRLVA SDYLEANLDL LEILMYGSHA
201: KPKPFVSLMG LTLPFVHLI
101: RMLELSKGIK EMKGILYGNG ADDPCEEACK QLTKEFFKKN TDTFRQFIVC LQYVNLDTQN DVTQVIANLQ RQKVDSRLVA SDYLEANLDL LEILMYGSHA
201: KPKPFVSLMG LTLPFVHLI
001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
Arabidopsis Description
At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.