CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42976	Canola	cytosol	72.15	33.33
GSMUA_AchrUn_...	Banana	cytosol	69.62	31.61
KRH11335	Soybean	extracellular	31.65	26.88
KRH08140	Soybean	plastid	30.38	25.0
KRH01988	Soybean	endoplasmic reticulum, extracellular	93.67	22.22
AT5G47540.1	Thale cress	cytosol	79.75	18.37
CDY40559	Canola	cytosol	79.75	18.37
CDY28923	Canola	cytosol, mitochondrion	79.75	18.37
Bra022139.1-P	Field mustard	cytosol	79.75	18.37
CDY17728	Canola	cytosol, mitochondrion	77.22	18.26
Bra024936.1-P	Field mustard	cytosol, mitochondrion	77.22	18.26
KRH11537	Soybean	cytosol	77.22	18.26
CDX77775	Canola	cytosol, mitochondrion	78.48	18.24
PGSC0003DMT400021798	Potato	cytosol	78.48	18.18
Solyc11g012400.1.1	Tomato	cytosol	77.22	17.94
PGSC0003DMT400034558	Potato	cytosol	77.22	17.94
VIT_10s0405g00020.t01	Wine grape	cytosol	77.22	17.94
KRH36554	Soybean	cytosol	75.95	17.91
Solyc05g054130.2.1	Tomato	cytosol	75.95	17.6
GSMUA_Achr1P22810_001	Banana	cytosol	68.35	16.07
AT4G17270.1	Thale cress	mitochondrion	69.62	16.04
CDX90480	Canola	cytosol	67.09	15.63
Bra012670.1-P	Field mustard	cytosol	67.09	15.63
CDY09635	Canola	cytosol, mitochondrion	67.09	15.63
Zm00001d021954_P003	Maize	plasma membrane	65.82	15.48
Os07t0585100-01	Rice	plasma membrane	65.82	15.48
HORVU2Hr1G036030.1	Barley	cytosol	64.56	15.13
TraesCS2D01G197000.1	Wheat	golgi	64.56	15.13
TraesCS2B01G216100.1	Wheat	cytosol	64.56	15.13
TraesCS2A01G191000.1	Wheat	cytosol	64.56	15.13
Zm00001d006710_P004	Maize	mitochondrion	63.29	14.88
CDY25960	Canola	cytosol	68.35	14.52
Bra026241.1-P	Field mustard	mitochondrion	49.37	14.03
Bra017480.1-P	Field mustard	cytosol	68.35	13.99
CDY41055	Canola	mitochondrion	68.35	13.95
Os03t0172200-01	Rice	plasma membrane	54.43	12.01
Zm00001d027862_P002	Maize	plastid	54.43	11.65
KRH74028	Soybean	cytosol	51.9	11.61
KRH14096	Soybean	cytosol	51.9	11.61
KRH20946	Soybean	cytosol	48.1	11.21
TraesCS4A01G015400.2	Wheat	plastid	51.9	11.14
TraesCS4D01G287400.4	Wheat	plastid	48.1	10.33
TraesCS4B01G288500.2	Wheat	plastid	45.57	9.78
OQU85418	Sorghum	cytosol	1.27	0.46
Bra014431.1-P	Field mustard	cytosol	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	0.0	0.0
CDY42975	Canola	mitochondrion	0.0	0.0

Protein Annotations

EMBL:ACUP02004730	EnsemblPlants:KRH51169	EnsemblPlantsGene:GLYMA_07G266100	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12
PFAM:PF08569	ProteinID:KRH51169	ProteinID:KRH51169.1	SUPFAM:SSF48371	UniParc:UPI0002966D1A	UniProt:K7L3Z3
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:43983552..43984411

Molecular Weight (calculated)

8940.8 Da

IEP (calculated)

5.132

GRAVY (calculated)

-0.181

Length

79 amino acids

Sequence
(BLAST)

1: MNLLRESSKS IQIEAFHVFE PFAANQKKAA DIISIFVANR SKLLRLLGDL KIDKEDEQFE ADKAQVIKEI AALEPRDIA

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.