Factsheet for Zm00001d027862_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85419	Sorghum	cytosol	89.16	89.65
KXG40077	Sorghum	plastid	88.89	75.06
Os03t0172200-01	Rice	plasma membrane	66.67	68.72
GSMUA_AchrUn_...	Banana	cytosol	30.35	64.37
GSMUA_Achr1P22810_001	Banana	cytosol	56.1	61.61
Zm00001d021954_P003	Maize	plasma membrane	55.83	61.31
TraesCS4A01G015400.2	Wheat	plastid	60.43	60.6
VIT_10s0405g00020.t01	Wine grape	cytosol	55.83	60.59
Zm00001d006710_P004	Maize	mitochondrion	55.01	60.42
TraesCS4D01G287400.4	Wheat	plastid	59.89	60.05
TraesCS4B01G288500.2	Wheat	plastid	59.89	60.05
Solyc05g054130.2.1	Tomato	cytosol	54.74	59.24
PGSC0003DMT400034558	Potato	cytosol	54.47	59.12
KRH36554	Soybean	cytosol	53.39	58.81
KRH11537	Soybean	cytosol	53.12	58.68
PGSC0003DMT400021798	Potato	cytosol	54.2	58.65
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	25.75	58.64
Bra024936.1-P	Field mustard	cytosol, mitochondrion	52.85	58.38
Solyc11g012400.1.1	Tomato	cytosol	53.66	58.24
CDY17728	Canola	cytosol, mitochondrion	52.57	58.08
CDY28923	Canola	cytosol, mitochondrion	53.93	58.02
Bra022139.1-P	Field mustard	cytosol	53.93	58.02
CDY40559	Canola	cytosol	53.66	57.73
CDX77775	Canola	cytosol, mitochondrion	53.12	57.65
AT5G47540.1	Thale cress	cytosol	53.39	57.43
VIT_19s0090g01550.t01	Wine grape	mitochondrion	52.03	57.14
Bra012670.1-P	Field mustard	cytosol	51.76	56.34
CDX90480	Canola	cytosol	51.76	56.34
CDY09635	Canola	cytosol, mitochondrion	51.49	56.05
AT4G17270.1	Thale cress	mitochondrion	52.03	55.98
KRH01988	Soybean	endoplasmic reticulum, extracellular	50.14	55.56
CDY42976	Canola	cytosol	25.75	55.56
Bra014431.1-P	Field mustard	cytosol	20.6	55.07
KRH51169	Soybean	cytosol	11.65	54.43
KRH74028	Soybean	cytosol	50.41	52.69
VIT_12s0057g00410.t01	Wine grape	cytosol	50.14	52.56
KRH14096	Soybean	cytosol	50.14	52.41
Bra026241.1-P	Field mustard	mitochondrion	39.02	51.8
CDY25960	Canola	cytosol	51.76	51.34
Bra017480.1-P	Field mustard	cytosol	51.22	48.96
CDY41055	Canola	mitochondrion	50.95	48.58
CDY42975	Canola	mitochondrion	22.76	47.19
Solyc07g065130.2.1	Tomato	plastid	50.68	45.5
PGSC0003DMT400057131	Potato	plastid	50.68	45.5
Zm00001d007058_P002	Maize	mitochondrion	29.54	28.84
Zm00001d029234_P016	Maize	mitochondrion	26.56	27.53

Protein Annotations

EnsemblPlants:Zm00001d027862_P002	EnsemblPlants:Zm00001d027862_T002	EnsemblPlantsGene:Zm00001d027862	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF16
PFAM:PF08569	ProteinID:ONL94130.1	ProteinID:ONL94131.1	SEG:seg	SUPFAM:SSF48371	UniParc:UPI000843220F
UniProt:A0A1D6JQ64	MapMan:35.1	:	:	:	:

Description

Calcium-binding protein 39

Coordinates

chr1:-:15669005..15673015

Molecular Weight (calculated)

42301.0 Da

IEP (calculated)

7.850

GRAVY (calculated)

-0.266

Length

369 amino acids

Sequence
(BLAST)

001: MTGCLWPCVG AAVAGHGAGH RKAGLFRSKP RTPAEVVQHA RDLVTYILDN KDGCGAGKRD AKHEHRMVEL SKEVKEMKGI LYGNGEEDPC EEACKQLTKE
101: FFKKDTDTFR QLIVCLQYVD LETQKDITQV IANLQRQKVD SRLVASDYLE TNLDLLDILM SGYGNLDIAI HYSTLLRDCI RHQVAARYVL ESPHFRTFFD
201: HIQFPDFNVQ SDVFKTFKEL MTRHKSTAAE FFSKNYDWFF AEFNSKLILS ASNYFIRRKA IQLLRDILLE RSNAAVMVRY VSSKEHLMIQ MNLLRDESIA
301: IQVEAFHVFK LFVANKEQAP EITGILLANR SKLLRFLKDF TTVEKDDKKF EADKATVISE ILALNGAEK

Best Arabidopsis Sequence Match ( AT2G03410.1 )
(BLAST)

001: MKGLFKNKSR LPGEIVRQTR DLIALAESEE EETDARNSKR LGICAELCRN IRDLKSILYG NGEAEPVPEA CLLLTQEFFR ADTLRPLIKS IPKLDLEARK
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR

Arabidopsis Description

MO25-like protein At2g03410 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ77]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.