Factsheet for GSMUA_Achr1P22810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	41.67	86.42
GSMUA_AchrUn_...	Banana	cytosol	43.75	84.48
Os07t0585100-01	Rice	plasma membrane	81.25	81.25
HORVU2Hr1G036030.1	Barley	cytosol	80.06	79.82
TraesCS2D01G197000.1	Wheat	golgi	80.06	79.82
TraesCS2B01G216100.1	Wheat	cytosol	80.06	79.82
Zm00001d021954_P003	Maize	plasma membrane	79.76	79.76
TraesCS2A01G191000.1	Wheat	cytosol	79.76	79.53
OQU90170	Sorghum	cytosol	79.46	79.46
Zm00001d006710_P004	Maize	mitochondrion	78.57	78.57
KRH11537	Soybean	cytosol	77.98	78.44
KRH36554	Soybean	cytosol	77.68	77.91
VIT_10s0405g00020.t01	Wine grape	cytosol	78.27	77.35
PGSC0003DMT400034558	Potato	cytosol	76.79	75.88
Solyc11g012400.1.1	Tomato	cytosol	76.19	75.29
CDY40559	Canola	cytosol	76.19	74.64
KRH01988	Soybean	endoplasmic reticulum, extracellular	73.81	74.47
Bra022139.1-P	Field mustard	cytosol	75.89	74.34
CDY28923	Canola	cytosol, mitochondrion	75.89	74.34
Bra024936.1-P	Field mustard	cytosol, mitochondrion	73.81	74.25
CDY17728	Canola	cytosol, mitochondrion	73.51	73.95
AT5G47540.1	Thale cress	cytosol	75.3	73.76
CDX77775	Canola	cytosol, mitochondrion	74.11	73.24
Solyc05g054130.2.1	Tomato	cytosol	73.51	72.43
PGSC0003DMT400021798	Potato	cytosol	73.21	72.14
CDX90480	Canola	cytosol	72.32	71.68
Bra012670.1-P	Field mustard	cytosol	72.32	71.68
CDY09635	Canola	cytosol, mitochondrion	71.73	71.09
VIT_19s0090g01550.t01	Wine grape	mitochondrion	70.83	70.83
Bra014431.1-P	Field mustard	cytosol	28.87	70.29
AT4G17270.1	Thale cress	mitochondrion	71.73	70.26
KRH51169	Soybean	cytosol	16.07	68.35
CDY42976	Canola	cytosol	33.63	66.08
CDY25960	Canola	cytosol	72.62	65.59
Bra026241.1-P	Field mustard	mitochondrion	53.27	64.39
VIT_12s0057g00410.t01	Wine grape	cytosol	67.26	64.2
Bra017480.1-P	Field mustard	cytosol	72.32	62.95
CDY41055	Canola	mitochondrion	71.73	62.27
KRH74028	Soybean	cytosol	64.29	61.19
KRH14096	Soybean	cytosol	63.69	60.62
CDY42975	Canola	mitochondrion	31.25	58.99
Os03t0172200-01	Rice	plasma membrane	62.5	58.66
OQU85419	Sorghum	cytosol	62.8	57.49
Zm00001d027862_P002	Maize	plastid	61.61	56.1
PGSC0003DMT400057131	Potato	plastid	67.56	55.23
Solyc07g065130.2.1	Tomato	plastid	66.96	54.74
TraesCS4A01G015400.2	Wheat	plastid	55.95	51.09
TraesCS4D01G287400.4	Wheat	plastid	55.06	50.27
TraesCS4B01G288500.2	Wheat	plastid	54.76	50.0
KXG40077	Sorghum	plastid	62.8	48.28
GSMUA_Achr5P27410_001	Banana	cytosol	38.69	44.83
GSMUA_Achr11P...	Banana	cytosol	41.07	41.95

Protein Annotations

EnsemblPlants:GSMUA_Achr1P22810_001	EnsemblPlants:GSMUA_Achr1T22810_001	EnsemblPlantsGene:GSMUA_Achr1G22810_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	ncoils:Coil	PANTHER:PTHR10182
PANTHER:PTHR10182:SF12	PFAM:PF08569	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0002967E29	UniProt:M0S289
MapMan:35.1	:	:	:	:	:

Description

Putative MO25-like protein At5g47540 [Source:GMGC_GENE;Acc:GSMUA_Achr1G22810_001]

Coordinates

chr1:-:17164002..17172032

Molecular Weight (calculated)

39217.5 Da

IEP (calculated)

8.288

GRAVY (calculated)

-0.351

Length

336 amino acids

Sequence
(BLAST)

001: MKGLFKSKPR TPADVVRQAR DLLVYVDLNW NSQDAKRQEK QMAELCKNLR ELKFILYGNS ESEPIAEACA QLTQEFFREN TLRLLIICLP KFNLEGRKDA
101: TQVVANLQRQ QVHSRLIASE YLEANKDLLD LLISGYEDMD IALHYGAMLR ECIRHQSIAR YVLESDHMKK FFDFIQLPNF DIASDAYATF KELMTRHKST
201: VAEYLSKNYE WFFTEFNSRL LSSPNYITRR QAVKLLGDML LDRSNSAVMV RYVSSKDNLM ILMNLLRESS KNIQIEAFHV FKLFVANQNK PPEIISILTT
301: NKKKLLRLLQ DIKLDKEDEQ FEGDKAQVIR EIEALN

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.