Factsheet for Zm00001d021954_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90170	Sorghum	cytosol	99.11	99.11
Zm00001d006710_P004	Maize	mitochondrion	97.92	97.92
Os07t0585100-01	Rice	plasma membrane	93.15	93.15
TraesCS2D01G197000.1	Wheat	golgi	87.8	87.54
TraesCS2B01G216100.1	Wheat	cytosol	87.8	87.54
TraesCS2A01G191000.1	Wheat	cytosol	87.5	87.24
HORVU2Hr1G036030.1	Barley	cytosol	87.2	86.94
GSMUA_AchrUn_...	Banana	cytosol	43.45	83.91
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	38.69	80.25
GSMUA_Achr1P22810_001	Banana	cytosol	79.76	79.76
PGSC0003DMT400034558	Potato	cytosol	77.68	76.76
Solyc11g012400.1.1	Tomato	cytosol	77.68	76.76
VIT_10s0405g00020.t01	Wine grape	cytosol	77.38	76.47
Solyc05g054130.2.1	Tomato	cytosol	77.38	76.25
KRH11537	Soybean	cytosol	75.6	76.05
KRH36554	Soybean	cytosol	75.6	75.82
PGSC0003DMT400021798	Potato	cytosol	76.79	75.66
Bra024936.1-P	Field mustard	cytosol, mitochondrion	75.0	75.45
CDY17728	Canola	cytosol, mitochondrion	74.7	75.15
CDX77775	Canola	cytosol, mitochondrion	75.6	74.71
CDY28923	Canola	cytosol, mitochondrion	76.19	74.64
CDY40559	Canola	cytosol	76.19	74.64
Bra022139.1-P	Field mustard	cytosol	76.19	74.64
AT5G47540.1	Thale cress	cytosol	75.6	74.05
KRH01988	Soybean	endoplasmic reticulum, extracellular	72.32	72.97
Bra014431.1-P	Field mustard	cytosol	29.17	71.01
AT4G17270.1	Thale cress	mitochondrion	71.73	70.26
VIT_19s0090g01550.t01	Wine grape	mitochondrion	69.94	69.94
CDX90480	Canola	cytosol	69.94	69.32
Bra012670.1-P	Field mustard	cytosol	69.94	69.32
CDY09635	Canola	cytosol, mitochondrion	69.35	68.73
CDY25960	Canola	cytosol	74.11	66.94
KRH51169	Soybean	cytosol	15.48	65.82
Bra017480.1-P	Field mustard	cytosol	73.81	64.25
CDY41055	Canola	mitochondrion	73.51	63.82
KRH74028	Soybean	cytosol	66.67	63.46
VIT_12s0057g00410.t01	Wine grape	cytosol	66.07	63.07
Bra026241.1-P	Field mustard	mitochondrion	52.08	62.95
KRH14096	Soybean	cytosol	65.48	62.32
CDY42976	Canola	cytosol	31.55	61.99
CDY42975	Canola	mitochondrion	30.65	57.87
Zm00001d027862_P002	Maize	plastid	61.31	55.83
PGSC0003DMT400057131	Potato	plastid	67.56	55.23
Solyc07g065130.2.1	Tomato	plastid	66.67	54.5
Zm00001d007058_P002	Maize	mitochondrion	42.26	37.57
Zm00001d029234_P016	Maize	mitochondrion	32.74	30.9

Protein Annotations

EMBL:BT064166	EnsemblPlants:Zm00001d021954_P003	EnsemblPlants:Zm00001d021954_T003	EnsemblPlantsGene:Zm00001d021954	EntrezGene:100382399	Gene3D:1.25.10.10
GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25
PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569	ProteinID:ONM59134.1	ProteinID:ONM59137.1	SUPFAM:SSF48371
UniParc:UPI0001948CF6	UniProt:C0P797	MapMan:35.1	:	:	:

Description

Putative MO25-like protein

Coordinates

chr7:+:167040492..167048024

Molecular Weight (calculated)

38969.1 Da

IEP (calculated)

8.072

GRAVY (calculated)

-0.334

Length

336 amino acids

Sequence
(BLAST)

001: MKGLFKSKPR TPVDIVRQTR ECLVYLDLHS DSRSGDAKRE EKMTELSKNI RDMKSILYGN GESEPVTEAC VQLTQEFFRE NTLRLLIIHL PKLNLETRKD
101: ATQVVANLQR QQVSSKIVAS EYLESNKDLL DILILGYENM DIALHYGAML RECIRHQSIA RYVLESEHMK KFFDYIQLPN FDIASDASAT FKELLTRHKA
201: TVAEFLSNNY DWFFEEFNSR LLSSTNYITK RQAIKLLGDM LLDRSNAAVM MRYVSSKDNL MILMNLLRDS SKNIQIEAFH VFKLFAANKN KPPEVVNILV
301: TNRSKLLRFF AGFKIDKEDE QFEADKEQVI KEISAL

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.