Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G216100.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU2Hr1G036030.1 | Barley | cytosol | 97.33 | 97.33 |
| TraesCS2A01G191000.1 | Wheat | cytosol | 96.74 | 96.74 |
| Os07t0585100-01 | Rice | plasma membrane | 89.61 | 89.88 |
| Zm00001d021954_P003 | Maize | plasma membrane | 87.54 | 87.8 |
| OQU90170 | Sorghum | cytosol | 87.24 | 87.5 |
| Zm00001d006710_P004 | Maize | mitochondrion | 86.05 | 86.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.73 | 82.76 |
| GSMUA_Achr1P22810_001 | Banana | cytosol | 79.82 | 80.06 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 38.28 | 79.63 |
| PGSC0003DMT400034558 | Potato | cytosol | 78.04 | 77.35 |
| VIT_10s0405g00020.t01 | Wine grape | cytosol | 77.45 | 76.76 |
| Solyc11g012400.1.1 | Tomato | cytosol | 77.45 | 76.76 |
| Solyc05g054130.2.1 | Tomato | cytosol | 76.56 | 75.66 |
| PGSC0003DMT400021798 | Potato | cytosol | 76.56 | 75.66 |
| AT5G47540.1 | Thale cress | cytosol | 76.56 | 75.22 |
| KRH11537 | Soybean | cytosol | 74.48 | 75.15 |
| CDY28923 | Canola | cytosol, mitochondrion | 76.26 | 74.93 |
| Bra022139.1-P | Field mustard | cytosol | 76.26 | 74.93 |
| KRH36554 | Soybean | cytosol | 74.48 | 74.93 |
| Bra024936.1-P | Field mustard | cytosol, mitochondrion | 74.18 | 74.85 |
| CDY40559 | Canola | cytosol | 75.96 | 74.64 |
| CDY17728 | Canola | cytosol, mitochondrion | 73.89 | 74.55 |
| CDX77775 | Canola | cytosol, mitochondrion | 74.48 | 73.82 |
| KRH01988 | Soybean | endoplasmic reticulum, extracellular | 70.33 | 71.17 |
| VIT_19s0090g01550.t01 | Wine grape | mitochondrion | 70.33 | 70.54 |
| Bra014431.1-P | Field mustard | cytosol | 28.49 | 69.57 |
| AT4G17270.1 | Thale cress | mitochondrion | 70.62 | 69.39 |
| CDX90480 | Canola | cytosol | 69.14 | 68.73 |
| Bra012670.1-P | Field mustard | cytosol | 69.14 | 68.73 |
| CDY09635 | Canola | cytosol, mitochondrion | 68.84 | 68.44 |
| CDY25960 | Canola | cytosol | 72.4 | 65.59 |
| VIT_12s0057g00410.t01 | Wine grape | cytosol | 67.66 | 64.77 |
| KRH51169 | Soybean | cytosol | 15.13 | 64.56 |
| CDY42976 | Canola | cytosol | 32.64 | 64.33 |
| Bra017480.1-P | Field mustard | cytosol | 71.51 | 62.44 |
| CDY41055 | Canola | mitochondrion | 71.51 | 62.27 |
| Bra026241.1-P | Field mustard | mitochondrion | 51.04 | 61.87 |
| KRH74028 | Soybean | cytosol | 64.09 | 61.19 |
| KRH14096 | Soybean | cytosol | 63.5 | 60.62 |
| CDY42975 | Canola | mitochondrion | 29.67 | 56.18 |
| PGSC0003DMT400057131 | Potato | plastid | 68.25 | 55.96 |
| Solyc07g065130.2.1 | Tomato | plastid | 67.06 | 54.99 |
| TraesCS4D01G287400.4 | Wheat | plastid | 57.57 | 52.72 |
| TraesCS2D01G142500.1 | Wheat | mitochondrion | 41.54 | 41.67 |
| TraesCS3D01G340700.1 | Wheat | cytosol | 35.61 | 37.62 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G197000.1 | EnsemblPlantsGene:TraesCS2D01G197000 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Mo25 | PANTHER:PTHR10182 | PANTHER:PTHR10182:SF12 | PFAM:PF08569 |
| SUPFAM:SSF48371 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:143483488..143492823
Molecular Weight (calculated)
38899.9 Da
IEP (calculated)
8.297
GRAVY (calculated)
-0.357
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGLFKSKPR TPADVVRQTR ELLIYVDLHA GSRGADPKRE EEKMAELSKN IRDLKCILYG NGEHEPVTEA CVQLTQEFFR ENTLRLLIMC VPKVNLETRK
101: DSTQVVANLQ RQQVNSRILA SEYLEANKDL LDTLISGYED TEVALHYGAM LRECIRHQSI ARYVLESDHM KKFFDYIQIP NFDIASDASA TFKELLTRHK
201: ATVAEFLSKN YDWFFAEFNS RLLSSSNYIT KRQAIKLLGD MLLDRSNSAV MMRYVSSKDN LMILMNLLRD SSKNIQIESF HVFKLFAANK NKPAEVVNIL
301: VTNRSKLLRF FAGFKTDKED EQFEADKEQV IKEISAL
101: DSTQVVANLQ RQQVNSRILA SEYLEANKDL LDTLISGYED TEVALHYGAM LRECIRHQSI ARYVLESDHM KKFFDYIQIP NFDIASDASA TFKELLTRHK
201: ATVAEFLSKN YDWFFAEFNS RLLSSSNYIT KRQAIKLLGD MLLDRSNSAV MMRYVSSKDN LMILMNLLRD SSKNIQIESF HVFKLFAANK NKPAEVVNIL
301: VTNRSKLLRF FAGFKTDKED EQFEADKEQV IKEISAL
001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
Arabidopsis Description
At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.