Factsheet for TraesCS3D01G340700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G378800.1	Wheat	cytosol	97.81	97.81
TraesCS3A01G347100.1	Wheat	cytosol	97.81	97.81
Os03t0359700-01	Rice	plasma membrane	82.13	77.98
EER92235	Sorghum	mitochondrion	78.68	75.6
HORVU3Hr1G088310.1	Barley	cytosol	91.22	74.62
TraesCS2D01G142500.1	Wheat	mitochondrion	77.43	73.51
GSMUA_Achr5P27410_001	Banana	cytosol	58.31	64.14
GSMUA_Achr11P...	Banana	cytosol	65.52	63.53
Zm00001d029234_P016	Maize	mitochondrion	63.95	57.3
KRH20946	Soybean	cytosol	60.5	56.93
CDY13930	Canola	cytosol	61.13	56.52
CDX92571	Canola	cytosol	61.13	56.52
Bra002195.1-P	Field mustard	cytosol	61.13	56.52
AT5G18940.1	Thale cress	cytosol	60.81	56.23
VIT_05s0020g02410.t01	Wine grape	cytosol	60.19	55.65
Solyc01g080350.2.1	Tomato	plastid	58.93	55.29
PGSC0003DMT400033238	Potato	cytosol	58.62	54.52
TraesCS2D01G197000.1	Wheat	golgi	37.62	35.61
KRH08140	Soybean	plastid	10.03	33.33
KRH11335	Soybean	extracellular	8.78	30.11
TraesCS4D01G287400.4	Wheat	plastid	29.15	25.27

Protein Annotations

EnsemblPlants:TraesCS3D01G340700.1	EnsemblPlantsGene:TraesCS3D01G340700	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF15	PFAM:PF08569
SEG:seg	SUPFAM:SSF48371	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3D:-:454232162..454236409

Molecular Weight (calculated)

36475.4 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.023

Length

319 amino acids

Sequence
(BLAST)

001: MASTAGVVLS IKDSFLALPT KTGDRALEEV EKNISSLRQV LSGDGEAGAN QEQVLQIALE ICKEGVLSLF VQNLPSLGWG VRKDLVICWC ILLGQKVDEN
101: YCCVKYIEDH VELLDFLVVC YKKSDLALNC GIMVRECIKH PTLAKYILES NSFELFFEYV ELPNFDIASD ALNTFKDLLT KHETVVSVYL SSHYEQFFER
201: YTRILTSTNY VTRRQSVKFL SEFLLEPSNS KIMKRYIQEV RFLNIMIGLL KDSSKNIKIC AFHVFKVFVA NPNKPPGIIE ALRDNRKELL KLLHNLPASK
301: GEDELDEERD LIIHRIEKL

Best Arabidopsis Sequence Match ( AT5G18940.1 )
(BLAST)

001: MSFSFFKPSR PKTPQEVVKA IRDSLMALDT KTVVEVKALE KALEEVEKNF SSLRGILSGD GETEPNADQA VQLALEFCKE DVVSLVIHKL HILGWETRKD
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGKGSED DQFEEEKELI IEEIQKLSGL KNLER

Arabidopsis Description

At5g18940 [Source:UniProtKB/TrEMBL;Acc:Q8L9L9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.