Factsheet for GSMUA_Achr11P25240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P27410_001	Banana	cytosol	74.16	84.14
HORVU2Hr1G024780.11	Barley	cytosol	66.57	70.19
TraesCS2B01G163800.1	Wheat	mitochondrion	70.52	69.05
TraesCS2D01G142500.1	Wheat	mitochondrion	70.52	69.05
TraesCS2A01G139800.1	Wheat	mitochondrion	70.21	68.75
EER97658	Sorghum	mitochondrion	70.21	68.75
Os07t0647100-01	Rice	mitochondrion	69.91	68.25
KRH20946	Soybean	cytosol	68.69	66.67
TraesCS3B01G378800.1	Wheat	cytosol	63.53	65.52
TraesCS3D01G340700.1	Wheat	cytosol	63.53	65.52
Os03t0359700-01	Rice	plasma membrane	66.87	65.48
EER92235	Sorghum	mitochondrion	65.65	65.06
VIT_05s0020g02410.t01	Wine grape	cytosol	68.09	64.93
TraesCS3A01G347100.1	Wheat	cytosol	62.31	64.26
Solyc01g080350.2.1	Tomato	plastid	65.96	63.82
PGSC0003DMT400033238	Potato	cytosol	65.96	63.27
Bra002195.1-P	Field mustard	cytosol	66.26	63.19
CDX92571	Canola	cytosol	66.26	63.19
AT5G18940.1	Thale cress	cytosol	66.26	63.19
CDY13930	Canola	cytosol	65.96	62.9
Zm00001d007058_P002	Maize	mitochondrion	69.0	60.05
HORVU3Hr1G088310.1	Barley	cytosol	62.01	52.31
Zm00001d029234_P016	Maize	mitochondrion	53.8	49.72
GSMUA_AchrUn_...	Banana	cytosol	26.14	49.43
GSMUA_Achr1P22810_001	Banana	cytosol	41.95	41.07
KRH08140	Soybean	plastid	11.85	40.62
KRH11335	Soybean	extracellular	10.94	38.71
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	15.5	31.48

Protein Annotations

EnsemblPlants:GSMUA_Achr11P25240_001	EnsemblPlants:GSMUA_Achr11T25240_001	EnsemblPlantsGene:GSMUA_Achr11G25240_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF15
PFAM:PF08569	SEG:seg	SUPFAM:SSF48371	UniParc:UPI000295846C	UniProt:M0RVA4	MapMan:35.1

Description

Putative Calcium-binding protein 39 [Source:GMGC_GENE;Acc:GSMUA_Achr11G25240_001]

Coordinates

chr11:+:24430781..24437552

Molecular Weight (calculated)

37822.1 Da

IEP (calculated)

4.861

GRAVY (calculated)

-0.000

Length

329 amino acids

Sequence
(BLAST)

001: MSFLFKSSPR PKPTPAELAK AIKESFLALD TSTFAKALEE VQKNILSMRQ MLSGDGEVEP NDDHISQLAI EICKGDVLAL FVHKLPSLSW EARKDLVHCW
101: SSLLMQNCCV EYIENNLELV DFLVICYNNK EIALSCGNML RECIKYPTLA KCILESNSFE LFFKYVELPT FDIASDALAT FKDLLTKHET VVSEFLISHY
201: DQFFELYEKL LTSPNYLTRR QSLKILSDFL LESQNLQTMK RFILEVRFLN IMMALLKDTS KNIQISAFHI FKVFVANPNK PPVIINVLID NHEELLMSLQ
301: NLPMSKGEDD QFEEEKDLII KEIEKLSGL

Best Arabidopsis Sequence Match ( AT5G18940.1 )
(BLAST)

001: MSFSFFKPSR PKTPQEVVKA IRDSLMALDT KTVVEVKALE KALEEVEKNF SSLRGILSGD GETEPNADQA VQLALEFCKE DVVSLVIHKL HILGWETRKD
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGKGSED DQFEEEKELI IEEIQKLSGL KNLER

Arabidopsis Description

At5g18940 [Source:UniProtKB/TrEMBL;Acc:Q8L9L9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.