Factsheet for TraesCS2B01G163800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G142500.1	Wheat	mitochondrion	99.4	99.4
TraesCS2A01G139800.1	Wheat	mitochondrion	99.4	99.4
HORVU2Hr1G024780.11	Barley	cytosol	88.1	94.87
EER97658	Sorghum	mitochondrion	89.29	89.29
Os07t0647100-01	Rice	mitochondrion	88.1	87.83
TraesCS3B01G378800.1	Wheat	cytosol	73.21	77.12
Zm00001d007058_P002	Maize	mitochondrion	86.31	76.72
GSMUA_Achr5P27410_001	Banana	cytosol	61.31	71.03
GSMUA_Achr11P...	Banana	cytosol	69.05	70.52
KRH20946	Soybean	cytosol	64.58	64.01
VIT_05s0020g02410.t01	Wine grape	cytosol	65.48	63.77
AT5G18940.1	Thale cress	cytosol	64.58	62.9
CDY13930	Canola	cytosol	64.58	62.9
Solyc01g080350.2.1	Tomato	plastid	63.39	62.65
CDX92571	Canola	cytosol	64.29	62.61
Bra002195.1-P	Field mustard	cytosol	64.29	62.61
PGSC0003DMT400033238	Potato	cytosol	62.8	61.52
TraesCS2B01G216100.1	Wheat	cytosol	41.67	41.54
KRH08140	Soybean	plastid	11.31	39.58
KRH11335	Soybean	extracellular	10.71	38.71
TraesCS4B01G288500.2	Wheat	plastid	32.14	29.35

Protein Annotations

EnsemblPlants:TraesCS2B01G163800.1	EnsemblPlantsGene:TraesCS2B01G163800	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF15	PFAM:PF08569
SUPFAM:SSF48371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:136149725..136154700

Molecular Weight (calculated)

38987.2 Da

IEP (calculated)

5.862

GRAVY (calculated)

-0.121

Length

336 amino acids

Sequence
(BLAST)

001: MSFFFRAASR PRSSQQDLVR SIKDSLLALD TKTGAKALED VEKNIFTLRQ TLSGDGEVEP NQDHVLQIAL EICKEGVLSL FVQNLPSLGW EGRKDLAHCW
101: CILLRQKVDE SHCCVQYIEN HVDLLDFLVV CYKNLEVALN CGNMLRECIK YPSLAKYILE SNSFELFFQY VELPNFDIAS DALNTFKDLL TRHEDAVSEF
201: LISHYEQFFE LYKRLLTSDN YVTRRQSVKF LSEFLLEAPN AQIMKRYILE VRYLNIMMGL LKDSSKNIRI CSFHIFKVFV ANPNKPRDII QVLVDNHKEL
301: LKLLHALPAS KGEDEQLDEE RDLIIKEIEK LVRLSL

Best Arabidopsis Sequence Match ( AT5G18940.1 )
(BLAST)

001: MSFSFFKPSR PKTPQEVVKA IRDSLMALDT KTVVEVKALE KALEEVEKNF SSLRGILSGD GETEPNADQA VQLALEFCKE DVVSLVIHKL HILGWETRKD
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGKGSED DQFEEEKELI IEEIQKLSGL KNLER

Arabidopsis Description

At5g18940 [Source:UniProtKB/TrEMBL;Acc:Q8L9L9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.