Factsheet for PGSC0003DMT400033238

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080350.2.1	Tomato	plastid	96.5	97.35
VIT_05s0020g02410.t01	Wine grape	cytosol	80.47	80.0
KRH20946	Soybean	cytosol	73.18	74.04
Bra002195.1-P	Field mustard	cytosol	73.47	73.04
CDX92571	Canola	cytosol	73.47	73.04
CDY13930	Canola	cytosol	73.47	73.04
AT5G18940.1	Thale cress	cytosol	73.47	73.04
GSMUA_Achr5P27410_001	Banana	cytosol	58.02	68.62
GSMUA_Achr11P...	Banana	cytosol	63.27	65.96
EER97658	Sorghum	mitochondrion	62.39	63.69
HORVU2Hr1G024780.11	Barley	cytosol	57.43	63.14
TraesCS2B01G163800.1	Wheat	mitochondrion	61.52	62.8
TraesCS2A01G139800.1	Wheat	mitochondrion	61.52	62.8
TraesCS2D01G142500.1	Wheat	mitochondrion	61.22	62.5
Os07t0647100-01	Rice	mitochondrion	61.22	62.31
EER92235	Sorghum	mitochondrion	58.89	60.84
Os03t0359700-01	Rice	plasma membrane	58.89	60.12
TraesCS3B01G378800.1	Wheat	cytosol	55.39	59.56
TraesCS3D01G340700.1	Wheat	cytosol	54.52	58.62
TraesCS3A01G347100.1	Wheat	cytosol	53.94	57.99
Zm00001d007058_P002	Maize	mitochondrion	60.64	55.03
HORVU3Hr1G088310.1	Barley	cytosol	54.81	48.21
Zm00001d029234_P016	Maize	mitochondrion	49.56	47.75
KRH08140	Soybean	plastid	13.12	46.88
KRH11335	Soybean	extracellular	11.95	44.09
PGSC0003DMT400034558	Potato	cytosol	41.98	42.35
PGSC0003DMT400021798	Potato	cytosol	41.69	41.94
PGSC0003DMT400057131	Potato	plastid	39.36	32.85

Protein Annotations

EnsemblPlants:PGSC0003DMT400033238	EnsemblPlantsGene:PGSC0003DMG400012764	EntrezGene:102605802	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	ncoils:Coil	PANTHER:PTHR10182
PANTHER:PTHR10182:SF15	PFAM:PF08569	PGSC:PGSC0003DMG400012764	RefSeq:XP_006339427.1	RefSeq:XP_015166746.1	SEG:seg
SUPFAM:SSF48371	UniParc:UPI0002952BD5	UniProt:M1AYT6	MapMan:35.1	:	:

Description

Mo25 family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012764]

Coordinates

chr1:+:61092520..61099543

Molecular Weight (calculated)

39151.6 Da

IEP (calculated)

5.690

GRAVY (calculated)

-0.089

Length

343 amino acids

Sequence
(BLAST)

001: MSFSFFKASR PKTPSELAKT VKDSFNALDS ITVAEVKALE KAMEEVEKNI VAMKVMLAGD GEVEPNPDQV AQLTLEVCNE DVIALFIHKL LILGWEARKN
101: LVHCWSIMLK QKVDSTYCCV QYMENHLELL DFLVVCYDNK EIATHCGGML RECIKLPSLA KYILESPSFG LFFKFVELPN FDVASDAFST FKDLLTKHES
201: AVSQYLTNNY SEFFEQYEKL LTSPNYVTRR QSLKLLSEFL LEPPNSLIMK RYIAEVSHLK VMMNLLKDSS KNIQISAFHI FKVFVANPNK PREIKLILAK
301: NHEGLLALLN NLGKGGEDDQ FEEEKELIMK EIEKVSRLAN LES

Best Arabidopsis Sequence Match ( AT5G18940.2 )
(BLAST)

001: MSFSFFKPSR PKTPQEVVKA IRDSLMALDT KTVVEVKALE KALEEVEKNF SSLRGILSGD GETEPNADQA VQLALEFCKE DVVSLVIHKL HILGWETRKD
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGSEDDQ FEEEKELIIE EIQKLSGLKN LER

Arabidopsis Description

At5g18940 [Source:UniProtKB/TrEMBL;Acc:Q8L9L9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.