Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g012400.1.1 | Tomato | cytosol | 98.82 | 98.82 |
| VIT_10s0405g00020.t01 | Wine grape | cytosol | 87.35 | 87.35 |
| PGSC0003DMT400021798 | Potato | cytosol | 86.18 | 85.92 |
| KRH11537 | Soybean | cytosol | 81.76 | 83.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.35 | 82.76 |
| KRH36554 | Soybean | cytosol | 81.47 | 82.69 |
| AT5G47540.1 | Thale cress | cytosol | 82.06 | 81.34 |
| CDY40559 | Canola | cytosol | 81.76 | 81.05 |
| Bra022139.1-P | Field mustard | cytosol | 81.47 | 80.76 |
| CDY28923 | Canola | cytosol, mitochondrion | 81.47 | 80.76 |
| Bra024936.1-P | Field mustard | cytosol, mitochondrion | 78.24 | 79.64 |
| CDY17728 | Canola | cytosol, mitochondrion | 77.94 | 79.34 |
| KRH01988 | Soybean | endoplasmic reticulum, extracellular | 77.35 | 78.98 |
| CDX77775 | Canola | cytosol, mitochondrion | 78.53 | 78.53 |
| AT4G17270.1 | Thale cress | mitochondrion | 79.12 | 78.43 |
| HORVU2Hr1G036030.1 | Barley | cytosol | 77.65 | 78.34 |
| TraesCS2B01G216100.1 | Wheat | cytosol | 77.35 | 78.04 |
| TraesCS2D01G197000.1 | Wheat | golgi | 77.35 | 78.04 |
| Zm00001d021954_P003 | Maize | plasma membrane | 76.76 | 77.68 |
| TraesCS2A01G191000.1 | Wheat | cytosol | 76.76 | 77.45 |
| Os07t0585100-01 | Rice | plasma membrane | 76.47 | 77.38 |
| KRH51169 | Soybean | cytosol | 17.94 | 77.22 |
| GSMUA_Achr1P22810_001 | Banana | cytosol | 75.88 | 76.79 |
| CDY09635 | Canola | cytosol, mitochondrion | 76.18 | 76.4 |
| CDX90480 | Canola | cytosol | 76.18 | 76.4 |
| Bra012670.1-P | Field mustard | cytosol | 76.18 | 76.4 |
| Zm00001d006710_P004 | Maize | mitochondrion | 75.29 | 76.19 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 35.29 | 74.07 |
| CDY42976 | Canola | cytosol | 35.59 | 70.76 |
| Bra026241.1-P | Field mustard | mitochondrion | 56.76 | 69.42 |
| Bra014431.1-P | Field mustard | cytosol | 27.94 | 68.84 |
| CDY25960 | Canola | cytosol | 74.12 | 67.74 |
| Bra017480.1-P | Field mustard | cytosol | 74.12 | 65.28 |
| CDY41055 | Canola | mitochondrion | 73.82 | 64.86 |
| CDY42975 | Canola | mitochondrion | 31.76 | 60.67 |
| Os03t0172200-01 | Rice | plasma membrane | 62.94 | 59.78 |
| PGSC0003DMT400057131 | Potato | plastid | 71.18 | 58.88 |
| Zm00001d027862_P002 | Maize | plastid | 59.12 | 54.47 |
| TraesCS4A01G015400.2 | Wheat | plastid | 57.35 | 52.99 |
| TraesCS4D01G287400.4 | Wheat | plastid | 56.47 | 52.17 |
| TraesCS4B01G288500.2 | Wheat | plastid | 56.18 | 51.9 |
| PGSC0003DMT400033238 | Potato | cytosol | 42.35 | 41.98 |
| OQU85418 | Sorghum | cytosol | 20.29 | 31.51 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400034558 | EnsemblPlantsGene:PGSC0003DMG401013284 | EntrezGene:102594580 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Mo25 | PANTHER:PTHR10182 | PANTHER:PTHR10182:SF12 |
| PFAM:PF08569 | PGSC:PGSC0003DMG401013284 | RefSeq:XP_006352351.1 | SUPFAM:SSF48371 | UniParc:UPI0002967870 | UniProt:M1B0W6 |
| MapMan:35.1 | : | : | : | : | : |
Description
Calcium-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401013284]
Coordinates
chr11:-:460377..468100
Molecular Weight (calculated)
39478.8 Da
IEP (calculated)
8.287
GRAVY (calculated)
-0.380
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGLFKSKPK TPADLVRQTR ELLMYVERVN DTREGKREEK MMELSKSIRE LKIILYGNGE SEPLAEACAQ LTLEFFKENT LRLIINCLPN LNLETRKDAT
101: QVVANLQRQQ VQSRLIACDY LEANIDLMDK LILGYENTEM ALHYGAMLRE CIRHQSVARY VLESEHMKKF FDYIQLPNFD IAADAAATFK ELLTRHKSTV
201: AEFLSKNYDW FFTEYNSKLL ESSNYITRRQ AVKLLADMLL DRSNSAVMTR YVSSRDNLRI LMNLLRESSK SIQIEAFHVF KLFAANHNKP PDIVSILVAN
301: RSKLLRLFAD FKTEKEDEQF EADKAQVVKE IAALEPKENK
101: QVVANLQRQQ VQSRLIACDY LEANIDLMDK LILGYENTEM ALHYGAMLRE CIRHQSVARY VLESEHMKKF FDYIQLPNFD IAADAAATFK ELLTRHKSTV
201: AEFLSKNYDW FFTEYNSKLL ESSNYITRRQ AVKLLADMLL DRSNSAVMTR YVSSRDNLRI LMNLLRESSK SIQIEAFHVF KLFAANHNKP PDIVSILVAN
301: RSKLLRLFAD FKTEKEDEQF EADKAQVVKE IAALEPKENK
001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
Arabidopsis Description
At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.