CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11537	Soybean	cytosol	99.4	99.7
VIT_10s0405g00020.t01	Wine grape	cytosol	85.07	83.82
AT5G47540.1	Thale cress	cytosol	84.18	82.22
KRH01988	Soybean	endoplasmic reticulum, extracellular	81.49	81.98
PGSC0003DMT400034558	Potato	cytosol	82.69	81.47
Bra022139.1-P	Field mustard	cytosol	83.28	81.34
CDY28923	Canola	cytosol, mitochondrion	83.28	81.34
CDY40559	Canola	cytosol	82.99	81.05
Solyc11g012400.1.1	Tomato	cytosol	82.09	80.88
CDX77775	Canola	cytosol, mitochondrion	81.79	80.59
Bra024936.1-P	Field mustard	cytosol, mitochondrion	80.3	80.54
CDY17728	Canola	cytosol, mitochondrion	80.0	80.24
GSMUA_AchrUn_...	Banana	cytosol	41.19	79.31
Solyc05g054130.2.1	Tomato	cytosol	80.6	79.18
PGSC0003DMT400021798	Potato	cytosol	80.0	78.59
Bra012670.1-P	Field mustard	cytosol	79.4	78.47
CDX90480	Canola	cytosol	79.4	78.47
CDY09635	Canola	cytosol, mitochondrion	79.1	78.17
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	37.61	77.78
GSMUA_Achr1P22810_001	Banana	cytosol	77.91	77.68
AT4G17270.1	Thale cress	mitochondrion	79.4	77.55
Os07t0585100-01	Rice	plasma membrane	77.61	77.38
KRH51169	Soybean	cytosol	17.91	75.95
Zm00001d021954_P003	Maize	plasma membrane	75.82	75.6
HORVU2Hr1G036030.1	Barley	cytosol	75.22	74.78
TraesCS2D01G197000.1	Wheat	golgi	74.93	74.48
TraesCS2B01G216100.1	Wheat	cytosol	74.93	74.48
TraesCS2A01G191000.1	Wheat	cytosol	74.93	74.48
Zm00001d006710_P004	Maize	mitochondrion	74.63	74.4
Bra014431.1-P	Field mustard	cytosol	30.15	73.19
CDY25960	Canola	cytosol	78.21	70.43
CDY42976	Canola	cytosol	35.52	69.59
Bra026241.1-P	Field mustard	mitochondrion	57.61	69.42
CDY41055	Canola	mitochondrion	77.61	67.18
Bra017480.1-P	Field mustard	cytosol	77.31	67.1
KRH74028	Soybean	cytosol	65.37	62.04
CDY42975	Canola	mitochondrion	32.84	61.8
KRH14096	Soybean	cytosol	64.78	61.47
Os03t0172200-01	Rice	plasma membrane	62.69	58.66
Zm00001d027862_P002	Maize	plastid	58.81	53.39
TraesCS4A01G015400.2	Wheat	plastid	57.01	51.9
TraesCS4D01G287400.4	Wheat	plastid	56.12	51.09
TraesCS4B01G288500.2	Wheat	plastid	55.82	50.82
KRH20946	Soybean	cytosol	42.99	42.48
KRH08140	Soybean	plastid	9.55	33.33
OQU85418	Sorghum	cytosol	20.3	31.05
KRH11335	Soybean	extracellular	7.46	26.88

Protein Annotations

EMBL:ACUP02005381	EnsemblPlants:KRH36554	EnsemblPlantsGene:GLYMA_09G011000	EntrezGene:100797189	Gene3D:1.25.10.10	GO:GO:0003674
GO:GO:0005488	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	ncoils:Coil
PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569	ProteinID:KRH36554	ProteinID:KRH36554.1	ProteinID:KRH36555.1
SUPFAM:SSF48371	UniParc:UPI00023CB63C	UniProt:I1L007	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr9:+:841764..846650

Molecular Weight (calculated)

39062.4 Da

IEP (calculated)

8.960

GRAVY (calculated)

-0.378

Length

335 amino acids

Sequence
(BLAST)

001: MKGLFKSKPR TPADVVRQTR DLLLFVDRSP ETRESKREEK QMSELFKNIR ELKSILYGNS ESEPVSEACA QLTQEFFKED TLRLLIKCLP KLNLEARKDA
101: TQVVANLQRQ QVQFKLIASD YLEKNMDLMD ILIVGYENQD MALHYGAMLR ECIRHQIVAK YVLNSPRMKK FFDYIQLPNF DIAADAAATF KELLTRHKST
201: VAEFLSKNYE WFFAEYNTKL LESSNYITRR QAVKLLGDML LDRSNSAVMT RYVSSRDNLR ILMNLLRESS KSIQIEAFHV FKLFAANQHK PADIVGIFVA
301: NKSKMLRLLE DFKIDKEDEQ FEADKAQVMR EIEAL

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.