Factsheet for Bra017480.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41055	Canola	mitochondrion	96.63	96.38
Bra024936.1-P	Field mustard	cytosol, mitochondrion	76.17	88.02
AT5G47540.1	Thale cress	cytosol	76.17	85.71
Bra022139.1-P	Field mustard	cytosol	75.13	84.55
Bra014431.1-P	Field mustard	cytosol	28.5	79.71
Bra012670.1-P	Field mustard	cytosol	68.91	78.47
KRH11537	Soybean	cytosol	67.1	77.54
KRH36554	Soybean	cytosol	67.1	77.31
VIT_10s0405g00020.t01	Wine grape	cytosol	67.88	77.06
KRH01988	Soybean	endoplasmic reticulum, extracellular	64.51	74.77
Solyc11g012400.1.1	Tomato	cytosol	65.28	74.12
PGSC0003DMT400034558	Potato	cytosol	65.28	74.12
Solyc05g054130.2.1	Tomato	cytosol	65.28	73.9
Zm00001d021954_P003	Maize	plasma membrane	64.25	73.81
PGSC0003DMT400021798	Potato	cytosol	64.77	73.31
GSMUA_AchrUn_...	Banana	cytosol	32.9	72.99
Zm00001d006710_P004	Maize	mitochondrion	63.21	72.62
GSMUA_Achr1P22810_001	Banana	cytosol	62.95	72.32
Os07t0585100-01	Rice	plasma membrane	62.69	72.02
Bra026241.1-P	Field mustard	mitochondrion	51.55	71.58
TraesCS2B01G216100.1	Wheat	cytosol	62.44	71.51
TraesCS2D01G197000.1	Wheat	golgi	62.44	71.51
HORVU2Hr1G036030.1	Barley	cytosol	62.18	71.22
TraesCS2A01G191000.1	Wheat	cytosol	61.92	70.92
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	29.53	70.37
KRH51169	Soybean	cytosol	13.99	68.35
Bra017387.1-P	Field mustard	cytosol	53.89	60.47
Os03t0172200-01	Rice	plasma membrane	50.78	54.75
Zm00001d027862_P002	Maize	plastid	48.96	51.22
TraesCS4A01G015400.2	Wheat	plastid	47.41	49.73
TraesCS4B01G288500.2	Wheat	plastid	47.15	49.46
TraesCS4D01G287400.4	Wheat	plastid	46.89	49.18
Bra002195.1-P	Field mustard	cytosol	37.56	42.03
OQU85418	Sorghum	cytosol	17.88	31.51

Protein Annotations

EnsemblPlants:Bra017480.1	EnsemblPlants:Bra017480.1-P	EnsemblPlantsGene:Bra017480	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12
PFAM:PF08569	SEG:seg	SUPFAM:SSF48371	UniParc:UPI00025423CF	UniProt:M4DLU9	MapMan:35.1

Description

AT5G47540 (E=5e-161) | binding

Coordinates

chrA09:+:15695272..15697692

Molecular Weight (calculated)

43839.7 Da

IEP (calculated)

7.198

GRAVY (calculated)

-0.219

Length

386 amino acids

Sequence
(BLAST)

001: MGGKEERVRI GSCVSTRGGA GRDASSAARR LPSQHLTSSS YAGDPPGLFK SKPRTPVDLV RQTRDLLLYA DRSNSSSLPD SKRHEKMAEL SRNIRDIKFI
101: LYGNSEAEPV AEACAQLTQE FFRQDTLRLF ITSLPILNLE TRKDATQVVA NLQRQQVNYK LIASDYLEAN LDLMDVLILG FENLDMALHY GAMFRECIRH
201: QIVAKYVLES EHVKKFFDYI QLANFDIAAD AAATFKELLT RHKSTVADFL TNNEEWFFAD YNSKLLESVN YVTRRQAIKL LGDILLDRSN SAVMAKYVSS
301: MDYLMILMNL LIESSKSIQI EAFHVFKLFV ANQNKPAEIV NILVTNRSKL LRLLADLRPD KEDERFEADK SQVLREISSL EPLVLA

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.