Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51169 | Soybean | cytosol | 33.33 | 72.15 |
| CDY37193 | Canola | cytosol | 20.47 | 71.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.16 | 62.07 |
| CDX90480 | Canola | cytosol | 81.87 | 41.3 |
| CDY09635 | Canola | cytosol, mitochondrion | 81.87 | 41.3 |
| AT4G17270.1 | Thale cress | mitochondrion | 80.7 | 40.23 |
| CDY17728 | Canola | cytosol, mitochondrion | 78.36 | 40.12 |
| CDX77775 | Canola | cytosol, mitochondrion | 78.95 | 39.71 |
| CDY28923 | Canola | cytosol, mitochondrion | 77.19 | 38.48 |
| CDY40559 | Canola | cytosol | 77.19 | 38.48 |
| VIT_10s0405g00020.t01 | Wine grape | cytosol | 73.68 | 37.06 |
| Bra026241.1-P | Field mustard | mitochondrion | 60.23 | 37.05 |
| PGSC0003DMT400021798 | Potato | cytosol | 73.1 | 36.66 |
| Solyc05g054130.2.1 | Tomato | cytosol | 72.51 | 36.36 |
| KRH01988 | Soybean | endoplasmic reticulum, extracellular | 70.76 | 36.34 |
| KRH11537 | Soybean | cytosol | 69.59 | 35.63 |
| PGSC0003DMT400034558 | Potato | cytosol | 70.76 | 35.59 |
| KRH36554 | Soybean | cytosol | 69.59 | 35.52 |
| Solyc11g012400.1.1 | Tomato | cytosol | 70.18 | 35.29 |
| GSMUA_Achr1P22810_001 | Banana | cytosol | 66.08 | 33.63 |
| CDY25960 | Canola | cytosol | 73.1 | 33.6 |
| TraesCS2D01G197000.1 | Wheat | golgi | 64.33 | 32.64 |
| TraesCS2B01G216100.1 | Wheat | cytosol | 64.33 | 32.64 |
| HORVU2Hr1G036030.1 | Barley | cytosol | 63.74 | 32.34 |
| CDY41055 | Canola | mitochondrion | 73.1 | 32.3 |
| Zm00001d006710_P004 | Maize | mitochondrion | 63.16 | 32.14 |
| TraesCS2A01G191000.1 | Wheat | cytosol | 63.16 | 32.05 |
| Zm00001d021954_P003 | Maize | plasma membrane | 61.99 | 31.55 |
| Os07t0585100-01 | Rice | plasma membrane | 61.99 | 31.55 |
| CDY04151 | Canola | cytosol | 61.4 | 30.52 |
| Os03t0172200-01 | Rice | plasma membrane | 56.14 | 26.82 |
| TraesCS4A01G015400.2 | Wheat | plastid | 55.56 | 25.82 |
| Zm00001d027862_P002 | Maize | plastid | 55.56 | 25.75 |
| TraesCS4D01G287400.4 | Wheat | plastid | 53.8 | 25.0 |
| TraesCS4B01G288500.2 | Wheat | plastid | 53.22 | 24.73 |
| CDY45561 | Canola | cytosol | 61.4 | 22.15 |
| CDX92571 | Canola | cytosol | 42.69 | 21.16 |
| CDY13930 | Canola | cytosol | 42.69 | 21.16 |
| CDY42975 | Canola | mitochondrion | 4.68 | 4.49 |
| OQU85418 | Sorghum | cytosol | 5.26 | 4.11 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 2.92 | 3.09 |
Protein Annotations
| EnsemblPlants:CDY42976 | EnsemblPlantsGene:GSBRNA2T00075757001 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Mo25 | PANTHER:PTHR10182 | PANTHER:PTHR10182:SF12 | PFAM:PF08569 |
| ProteinID:CDY42976 | ProteinID:CDY42976.1 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI0004EF2476 | UniProt:A0A078HZE6 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA01g17780DBnaA01g17780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZE6]
Coordinates
chrLK032540:+:246957..248259
Molecular Weight (calculated)
19946.3 Da
IEP (calculated)
9.402
GRAVY (calculated)
-0.113
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MILDFCKTHR YHFTSVIYFL QELLTRQKST VAEFLTKNEE WFFADFNSKL LESSNYITRR QAIKLLGDIL LDRSNSVVMT KYVSSMDNLR ILMNLLRESS
101: KTIQIEVFHV FKLFVANQKK PSDIINVLVA NRNKLLRLLA DLKLDKEDES FEADKAHVVS EIASLKPRDL A
101: KTIQIEVFHV FKLFVANQKK PSDIINVLVA NRNKLLRLLA DLKLDKEDES FEADKAHVVS EIASLKPRDL A
001: MKGLFKNKSR LPGEIVRQTR DLIALAESEE EETDARNSKR LGICAELCRN IRDLKSILYG NGEAEPVPEA CLLLTQEFFR ADTLRPLIKS IPKLDLEARK
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR
Arabidopsis Description
MO25-like protein At2g03410 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ77]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.