CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42976	Canola	cytosol	71.43	20.47
CDY04151	Canola	cytosol	79.59	11.34
AT2G03410.1	Thale cress	cytosol	75.51	10.63
CDX77775	Canola	cytosol, mitochondrion	73.47	10.59
CDY17728	Canola	cytosol, mitochondrion	71.43	10.48
CDX90480	Canola	cytosol	67.35	9.73
CDY09635	Canola	cytosol, mitochondrion	67.35	9.73
CDY28923	Canola	cytosol, mitochondrion	67.35	9.62
CDY40559	Canola	cytosol	67.35	9.62
CDY25960	Canola	cytosol	67.35	8.87
CDY41055	Canola	mitochondrion	67.35	8.53
CDY45561	Canola	cytosol	79.59	8.23
CDX92571	Canola	cytosol	46.94	6.67
CDY13930	Canola	cytosol	46.94	6.67
CDY42975	Canola	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:CDY37193	EnsemblPlantsGene:GSBRNA2T00063496001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569
ProteinID:CDY37193	ProteinID:CDY37193.1	SUPFAM:SSF48371	UniParc:UPI0004EC822B	UniProt:A0A078HK14	MapMan:35.2

Description

BnaC02g35010DBnaC02g35010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK14]

Coordinates

chrLK032394:+:317974..318123

Molecular Weight (calculated)

5644.7 Da

IEP (calculated)

4.346

GRAVY (calculated)

-0.504

Length

49 amino acids

Sequence
(BLAST)

1: MMNLLREPIK NIQIEAFHVF KLFVANEKKP EDIVAVDADK EDEGSEADR

Best Arabidopsis Sequence Match ( AT2G03410.1 )
(BLAST)

001: MKGLFKNKSR LPGEIVRQTR DLIALAESEE EETDARNSKR LGICAELCRN IRDLKSILYG NGEAEPVPEA CLLLTQEFFR ADTLRPLIKS IPKLDLEARK
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR

Arabidopsis Description

MO25-like protein At2g03410 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ77]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.