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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol, mitochondrion 53.93 59.26
Bra026241.1-P Field mustard mitochondrion 81.46 52.16
CDX90480 Canola cytosol 74.16 38.94
CDY09635 Canola cytosol, mitochondrion 73.03 38.35
AT4G17270.1 Thale cress mitochondrion 70.79 36.73
CDX77775 Canola cytosol, mitochondrion 66.85 35.0
CDY28923 Canola cytosol, mitochondrion 66.29 34.4
CDY40559 Canola cytosol 66.29 34.4
CDY17728 Canola cytosol, mitochondrion 63.48 33.83
VIT_10s0405g00020.t01 Wine grape cytosol 63.48 33.24
KRH11537 Soybean cytosol 61.8 32.93
KRH36554 Soybean cytosol 61.8 32.84
PGSC0003DMT400034558 Potato cytosol 60.67 31.76
GSMUA_Achr1P22810_001 Banana cytosol 58.99 31.25
CDY25960 Canola cytosol 65.17 31.18
KRH01988 Soybean endoplasmic reticulum, extracellular 57.87 30.93
Solyc11g012400.1.1 Tomato cytosol 58.99 30.88
Zm00001d021954_P003 Maize plasma membrane 57.87 30.65
CDY41055 Canola mitochondrion 66.29 30.49
Os07t0585100-01 Rice plasma membrane 57.3 30.36
HORVU2Hr1G036030.1 Barley cytosol 57.3 30.27
Solyc05g054130.2.1 Tomato cytosol 57.87 30.21
Zm00001d006710_P004 Maize mitochondrion 56.74 30.06
PGSC0003DMT400021798 Potato cytosol 57.3 29.91
TraesCS2D01G197000.1 Wheat golgi 56.18 29.67
TraesCS2B01G216100.1 Wheat cytosol 56.18 29.67
TraesCS2A01G191000.1 Wheat cytosol 55.62 29.38
CDY04151 Canola cytosol 51.69 26.74
OQU85418 Sorghum cytosol 30.9 25.11
Os03t0172200-01 Rice plasma membrane 46.07 22.91
Zm00001d027862_P002 Maize plastid 47.19 22.76
TraesCS4A01G015400.2 Wheat plastid 44.38 21.47
TraesCS4D01G287400.4 Wheat plastid 44.38 21.47
TraesCS4B01G288500.2 Wheat plastid 43.82 21.2
CDY45561 Canola cytosol 51.12 19.2
CDY13930 Canola cytosol 32.02 16.52
CDX92571 Canola cytosol 32.02 16.52
CDY42976 Canola cytosol 4.49 4.68
GSMUA_AchrUn_... Banana cytosol 2.81 2.87
KRH51169 Soybean cytosol 0.0 0.0
CDY37193 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY42975EnsemblPlantsGene:GSBRNA2T00075756001Gene3D:1.25.10.10GO:GO:0003674GO:GO:0005488InterPro:ARM-like
InterPro:ARM-type_foldInterPro:IPR011989InterPro:Mo25PANTHER:PTHR10182PANTHER:PTHR10182:SF12PFAM:PF08569
ProteinID:CDY42975ProteinID:CDY42975.1SUPFAM:SSF48371UniParc:UPI0004EE4853UniProt:A0A078HWZ3MapMan:35.1
Description
BnaA01g17790DBnaA01g17790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWZ3]
Coordinates
chrLK032540:+:245595..246895
Molecular Weight (calculated)
20250.4 Da
IEP (calculated)
8.612
GRAVY (calculated)
-0.311
Length
178 amino acids
Sequence
(BLAST)
001: MKGLFKSKPR TPPDIVRQTR DLLVYADRSV STPDLRESKS QEKLAELSKS LRESKLILYG NSEAEPVAEA CAQLTLEFFK GETLRGLITS LPYLSLEGRK
101: DATQVNSRLV ASDYLESNID LMDVLVDGFE THRSGVTLYG TMFRECIRHQ IVAKYVLDSQ HVKKFFLLRT ASQFRHCC
Best Arabidopsis Sequence Match ( AT2G03410.1 )
(BLAST)
001: MKGLFKNKSR LPGEIVRQTR DLIALAESEE EETDARNSKR LGICAELCRN IRDLKSILYG NGEAEPVPEA CLLLTQEFFR ADTLRPLIKS IPKLDLEARK
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR
Arabidopsis Description
MO25-like protein At2g03410 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ77]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.