Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017387.1-P | Field mustard | cytosol | 99.71 | 99.71 |
| AT2G03410.1 | Thale cress | cytosol | 87.21 | 86.21 |
| CDY37193 | Canola | cytosol | 11.34 | 79.59 |
| CDY45561 | Canola | cytosol | 98.84 | 71.73 |
| CDY17728 | Canola | cytosol, mitochondrion | 63.37 | 65.27 |
| CDY28923 | Canola | cytosol, mitochondrion | 64.83 | 65.01 |
| CDX77775 | Canola | cytosol, mitochondrion | 64.24 | 65.0 |
| CDY40559 | Canola | cytosol | 64.53 | 64.72 |
| CDY09635 | Canola | cytosol, mitochondrion | 63.37 | 64.31 |
| CDX90480 | Canola | cytosol | 63.08 | 64.01 |
| CDY42976 | Canola | cytosol | 30.52 | 61.4 |
| CDY25960 | Canola | cytosol | 59.88 | 55.38 |
| CDY41055 | Canola | mitochondrion | 60.17 | 53.49 |
| CDY42975 | Canola | mitochondrion | 26.74 | 51.69 |
| CDX92571 | Canola | cytosol | 38.08 | 37.97 |
| CDY13930 | Canola | cytosol | 38.08 | 37.97 |
Protein Annotations
| EnsemblPlants:CDY04151 | EnsemblPlantsGene:GSBRNA2T00117825001 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Mo25 | PANTHER:PTHR10182 | PANTHER:PTHR10182:SF12 | PFAM:PF08569 |
| ProteinID:CDY04151 | ProteinID:CDY04151.1 | SUPFAM:SSF48371 | UniParc:UPI0004EF2F6C | MapMan:35.1 | : |
Description
BnaA09g19290D
Coordinates
chrLK031949:+:657836..658870
Molecular Weight (calculated)
39699.1 Da
IEP (calculated)
7.657
GRAVY (calculated)
-0.333
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGLFKHKPR PPGEIVRQTR DLIALSENEN HETDMKHSKR LGICPEICRN IRELKSILYG NSEAEPVAEA CLSLTQEFFR EDTLRPLIKS LPKLDLEARK
101: DATQIVANLQ KQQVGSRLVA SEYLESNLDV IDTLVEGIGR DHHLALHYTG MLKECVRHQV VAKYILESKN LERFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVSEYLAK NYEWFFAEYN TRLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVRYVSSLD HLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ERKPEDIVAI
301: LVANRNKILR LFADLKPEKE DEGFEADKLL VVGEIASLSL KLSE
101: DATQIVANLQ KQQVGSRLVA SEYLESNLDV IDTLVEGIGR DHHLALHYTG MLKECVRHQV VAKYILESKN LERFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVSEYLAK NYEWFFAEYN TRLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVRYVSSLD HLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ERKPEDIVAI
301: LVANRNKILR LFADLKPEKE DEGFEADKLL VVGEIASLSL KLSE
001: MKGLFKNKSR LPGEIVRQTR DLIALAESEE EETDARNSKR LGICAELCRN IRDLKSILYG NGEAEPVPEA CLLLTQEFFR ADTLRPLIKS IPKLDLEARK
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR
Arabidopsis Description
MO25-like protein At2g03410 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ77]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.