CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017387.1-P	Field mustard	cytosol	71.94	99.13
CDY04151	Canola	cytosol	71.73	98.84
AT2G03410.1	Thale cress	cytosol	62.87	85.63
CDY37193	Canola	cytosol	8.23	79.59
CDY17728	Canola	cytosol, mitochondrion	45.78	64.97
CDY28923	Canola	cytosol, mitochondrion	46.84	64.72
CDX77775	Canola	cytosol, mitochondrion	46.41	64.71
CDY40559	Canola	cytosol	46.62	64.43
CDY09635	Canola	cytosol, mitochondrion	45.99	64.31
CDX90480	Canola	cytosol	45.78	64.01
CDY42976	Canola	cytosol	22.15	61.4
CDY25960	Canola	cytosol	43.46	55.38
CDY41055	Canola	mitochondrion	44.09	54.01
CDY42975	Canola	mitochondrion	19.2	51.12
CDX92571	Canola	cytosol	27.43	37.68
CDY13930	Canola	cytosol	27.43	37.68

Protein Annotations

EnsemblPlants:CDY45561	EnsemblPlantsGene:GSBRNA2T00082276001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569
ProteinID:CDY45561	ProteinID:CDY45561.1	SUPFAM:SSF48371	UniParc:UPI0004EE225B	UniProt:A0A078I6S6	MapMan:35.1

Description

BnaC09g21490DBnaC09g21490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6S6]

Coordinates

chrLK032628:-:86552..88767

Molecular Weight (calculated)

53847.5 Da

IEP (calculated)

9.051

GRAVY (calculated)

-0.468

Length

474 amino acids

Sequence
(BLAST)

001: MHPQASTRIA TEIHSTQLTR PKEGNSSHAP TEENHQKDLT RRKEVQCVKL GVLQKGKWFN GWETIGACVS KIGGAWRHGG SDVSPSSKHH RTGSHLRVST
101: TSYDDEVSIT FSGKLSSFSG NLGNVNGSNR MKGLFKHKPR SPGEIVRQTR DLIALSENEN QETDMKHSKR LGICPEICRN IRELKSILYG NSEAEPVAEA
201: CLSLTQEFFR EDTLRPLIKS LSKLDLEARK DATQIVANLQ KQQVGSRLVA SEYLESNLDV IDTLVEGIGR DHHLALHYTG MLKECVRHQV VAKYILESKN
301: LQRFFDYVQL PYFDVATDAS KIFRELLTRH KSTVSEYLAK NYEWFFAEYN TRLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVRYVSSLD HLRIMMNLLR
401: EPTKNIQLEA FHIFKLFVAN ERKPEDIVAI LVANRNKILR LFADLKPEKE DEGFEADKLL VVGEIASLSL KLSE

Best Arabidopsis Sequence Match ( AT2G03410.1 )
(BLAST)

001: MKGLFKNKSR LPGEIVRQTR DLIALAESEE EETDARNSKR LGICAELCRN IRDLKSILYG NGEAEPVPEA CLLLTQEFFR ADTLRPLIKS IPKLDLEARK
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR

Arabidopsis Description

MO25-like protein At2g03410 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ77]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.