Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G142500.1 | Wheat | mitochondrion | 94.87 | 88.1 |
| TraesCS2B01G163800.1 | Wheat | mitochondrion | 94.87 | 88.1 |
| TraesCS2A01G139800.1 | Wheat | mitochondrion | 94.87 | 88.1 |
| EER97658 | Sorghum | mitochondrion | 87.82 | 81.55 |
| Os07t0647100-01 | Rice | mitochondrion | 85.58 | 79.23 |
| GSMUA_Achr5P27410_001 | Banana | cytosol | 66.67 | 71.72 |
| Zm00001d007058_P002 | Maize | mitochondrion | 86.86 | 71.69 |
| GSMUA_Achr11P... | Banana | cytosol | 70.19 | 66.57 |
| VIT_05s0020g02410.t01 | Wine grape | cytosol | 64.74 | 58.55 |
| KRH20946 | Soybean | cytosol | 63.46 | 58.41 |
| HORVU3Hr1G088310.1 | Barley | cytosol | 72.76 | 58.21 |
| AT5G18940.1 | Thale cress | cytosol | 64.1 | 57.97 |
| Solyc01g080350.2.1 | Tomato | plastid | 63.14 | 57.94 |
| CDY13930 | Canola | cytosol | 63.78 | 57.68 |
| PGSC0003DMT400033238 | Potato | cytosol | 63.14 | 57.43 |
| Bra002195.1-P | Field mustard | cytosol | 63.46 | 57.39 |
| CDX92571 | Canola | cytosol | 63.46 | 57.39 |
| HORVU2Hr1G036030.1 | Barley | cytosol | 41.99 | 38.87 |
| KRH08140 | Soybean | plastid | 11.86 | 38.54 |
| KRH11335 | Soybean | extracellular | 11.22 | 37.63 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G024780.11 | EnsemblPlantsGene:HORVU2Hr1G024780 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Mo25 | PANTHER:PTHR10182 | PANTHER:PTHR10182:SF15 | PFAM:PF08569 |
| SUPFAM:SSF48371 | UniParc:UPI000B463F77 | UniProt:A0A287HE60 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:75773828..75777831
Molecular Weight (calculated)
36405.2 Da
IEP (calculated)
5.132
GRAVY (calculated)
-0.036
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: FLLMLYNSVY IQALEDVEKN IFTLRQTLSG DGEVEPNQDH VLQIALEICK EGVLSLFVQN LPSLGWEGRK DLAHCWCILL RQKVDESHCC VQYIENHVDL
101: LDFLVVCYKN LEVALNCGNM LRECIKYPSL AKYILESNSF ELFFQYVELP NFDIASDALN TFKDLLTKHE DAVSEFLISH YEQFFELYKR LLTSDNYVTR
201: RQSVKFLSEF LLEAPNAQIM KRYILEVRYL NIMMGLLKDS SKNIRICSFH IFKVFVANPN KPRDIIQVLV DNHKELLKLL HALPASKGED DQLDEERDLI
301: IKEIEKLVRL SV
101: LDFLVVCYKN LEVALNCGNM LRECIKYPSL AKYILESNSF ELFFQYVELP NFDIASDALN TFKDLLTKHE DAVSEFLISH YEQFFELYKR LLTSDNYVTR
201: RQSVKFLSEF LLEAPNAQIM KRYILEVRYL NIMMGLLKDS SKNIRICSFH IFKVFVANPN KPRDIIQVLV DNHKELLKLL HALPASKGED DQLDEERDLI
301: IKEIEKLVRL SV
001: MSFSFFKPSR PKTPQEVVKA IRDSLMALDT KTVVEVKALE KALEEVEKNF SSLRGILSGD GETEPNADQA VQLALEFCKE DVVSLVIHKL HILGWETRKD
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGKGSED DQFEEEKELI IEEIQKLSGL KNLER
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGKGSED DQFEEEKELI IEEIQKLSGL KNLER
Arabidopsis Description
At5g18940 [Source:UniProtKB/TrEMBL;Acc:Q8L9L9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.