Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021954_P003 | Maize | plasma membrane | 99.11 | 99.11 |
| Zm00001d006710_P004 | Maize | mitochondrion | 97.92 | 97.92 |
| Os07t0585100-01 | Rice | plasma membrane | 93.45 | 93.45 |
| TraesCS2A01G191000.1 | Wheat | cytosol | 87.5 | 87.24 |
| TraesCS2B01G216100.1 | Wheat | cytosol | 87.5 | 87.24 |
| TraesCS2D01G197000.1 | Wheat | golgi | 87.5 | 87.24 |
| HORVU2Hr1G036030.1 | Barley | cytosol | 87.2 | 86.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.45 | 83.91 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 38.39 | 79.63 |
| GSMUA_Achr1P22810_001 | Banana | cytosol | 79.46 | 79.46 |
| OQU85419 | Sorghum | cytosol | 62.5 | 57.22 |
| KXG40077 | Sorghum | plastid | 62.2 | 47.83 |
| EER97658 | Sorghum | mitochondrion | 42.86 | 42.86 |
| EER92235 | Sorghum | mitochondrion | 42.26 | 42.77 |
| OQU85418 | Sorghum | cytosol | 19.94 | 30.59 |
Protein Annotations
| EnsemblPlants:OQU90170 | EnsemblPlantsGene:SORBI_3002G355800 | EntrezGene:8058365 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Mo25 | PANTHER:PTHR10182 | PANTHER:PTHR10182:SF12 |
| PFAM:PF08569 | ProteinID:OQU90170 | ProteinID:OQU90170.1 | RefSeq:XP_002460933.1 | SUPFAM:SSF48371 | UniParc:UPI0001A837C6 |
| UniProt:A0A1W0W722 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:71884466..71890349
Molecular Weight (calculated)
38829.9 Da
IEP (calculated)
8.598
GRAVY (calculated)
-0.340
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGLFKSKPR TPVDIVRQTR EGLVQLDLHS GSRSGDAKRE EKMTELSKNI RDMKSILYGN GESEPVTEAC VQLTQEFFRE NTLRLLIIHL PKLNLETRKD
101: ATQVVANLQR QQVSSKIVAS EYLESNKDLL DILILGYENM DIALHYGAML RECIRHQSIA RYVLESEHMK KFFDYIQLPN FDIASDASAT FKELLTRHKA
201: TVAEFLSNNY DWFFEEFNSR LLSSTNYITK RQAIKLLGDM LLDRSNAAVM MRYVSSKDNL MILMNLLRDS SKNIQIEAFH VFKLFAANKN KPPEVVNILV
301: TNRSKLLRFF AGFKIDKEDE QFEADKEQVI KEISAL
101: ATQVVANLQR QQVSSKIVAS EYLESNKDLL DILILGYENM DIALHYGAML RECIRHQSIA RYVLESEHMK KFFDYIQLPN FDIASDASAT FKELLTRHKA
201: TVAEFLSNNY DWFFEEFNSR LLSSTNYITK RQAIKLLGDM LLDRSNAAVM MRYVSSKDNL MILMNLLRDS SKNIQIEAFH VFKLFAANKN KPPEVVNILV
301: TNRSKLLRFF AGFKIDKEDE QFEADKEQVI KEISAL
001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
Arabidopsis Description
At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.