Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85419 | Sorghum | cytosol | 81.92 | 97.55 |
| Zm00001d027862_P002 | Maize | plastid | 75.06 | 88.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.23 | 68.39 |
| Os03t0172200-01 | Rice | plasma membrane | 55.38 | 67.6 |
| GSMUA_Achr1P22810_001 | Banana | cytosol | 48.28 | 62.8 |
| OQU90170 | Sorghum | cytosol | 47.83 | 62.2 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 22.2 | 59.88 |
| TraesCS4A01G015400.2 | Wheat | plastid | 49.43 | 58.7 |
| TraesCS4B01G288500.2 | Wheat | plastid | 49.2 | 58.42 |
| TraesCS4D01G287400.4 | Wheat | plastid | 48.97 | 58.15 |
| OQU85418 | Sorghum | cytosol | 25.86 | 51.6 |
| EER92235 | Sorghum | mitochondrion | 27.23 | 35.84 |
| EER97658 | Sorghum | mitochondrion | 25.17 | 32.74 |
Protein Annotations
| EnsemblPlants:KXG40077 | EnsemblPlantsGene:SORBI_3001G487900 | EntrezGene:8059806 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Mo25 | PANTHER:PTHR10182 | PANTHER:PTHR10182:SF16 |
| PFAM:PF08569 | ProteinID:KXG40077 | ProteinID:KXG40077.1 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI00081ABAC2 |
| UniProt:A0A1B6QQ81 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:75789009..75794730
Molecular Weight (calculated)
50364.8 Da
IEP (calculated)
9.698
GRAVY (calculated)
-0.350
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MSACTYCDHA VVEKTLAKKP ATVLRIKSWT THVRRQRRRS RRRAESLARG RPARRARSSI GQTSGCWSIE MTGCLWPCVG AAVAEDGAGH RGLFRSKPRT
101: PAEVVQHVRY LVTYVLNNKD GCAGGRRDAK LEHRMLELSK GIKEMKGILY GNGEDDPCEE ACKQLTKEFF KKNTDTFRQF IVCLQYVNLD TQKDVTQVIA
201: NLQRQKVDSR LVASDYLEAN LDLLEILMSG YENLDIAIHY STLLRDCIRH QVAARYVLEC PHLRTFFDHI QFPDFNIQSD VFKTFKELMT RHKSTVAEFF
301: SKNYDWFFAE FNSKLILSAS NYFIRRQAVQ LLRDILLERS NSAVMMRYVS SKEHLMIHMN LLRDDSIAIQ VEAFHVFKLF VANKEQPPEI TSILRTNRSK
401: LLRFLKDFTT VEKDDKKFEA DKATVISKIL ALAGAEN
101: PAEVVQHVRY LVTYVLNNKD GCAGGRRDAK LEHRMLELSK GIKEMKGILY GNGEDDPCEE ACKQLTKEFF KKNTDTFRQF IVCLQYVNLD TQKDVTQVIA
201: NLQRQKVDSR LVASDYLEAN LDLLEILMSG YENLDIAIHY STLLRDCIRH QVAARYVLEC PHLRTFFDHI QFPDFNIQSD VFKTFKELMT RHKSTVAEFF
301: SKNYDWFFAE FNSKLILSAS NYFIRRQAVQ LLRDILLERS NSAVMMRYVS SKEHLMIHMN LLRDDSIAIQ VEAFHVFKLF VANKEQPPEI TSILRTNRSK
401: LLRFLKDFTT VEKDDKKFEA DKATVISKIL ALAGAEN
001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
Arabidopsis Description
At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.