Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007407.1-P | Field mustard | nucleus, plastid | 92.69 | 95.22 |
| CDX98311 | Canola | nucleus | 84.05 | 81.09 |
| CDX67755 | Canola | nucleus | 82.72 | 78.8 |
| AT3G58630.1 | Thale cress | nucleus | 81.06 | 76.01 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 40.53 | 49.39 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 40.86 | 47.31 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 39.53 | 47.22 |
| KRH27047 | Soybean | nucleus | 47.51 | 46.58 |
| KRH22283 | Soybean | nucleus | 46.84 | 46.08 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 41.2 | 45.93 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 36.88 | 43.53 |
| Solyc12g010890.1.1 | Tomato | nucleus | 45.85 | 42.72 |
| CDY36316 | Canola | nucleus | 32.56 | 38.89 |
| CDY00995 | Canola | nucleus | 32.56 | 38.28 |
| CDX70144 | Canola | cytosol | 31.23 | 37.6 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 42.86 | 37.18 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 38.21 | 36.39 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 38.54 | 36.36 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 38.21 | 36.16 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 38.21 | 36.16 |
| PGSC0003DMT400020194 | Potato | plastid | 45.18 | 35.51 |
| Os05t0560600-01 | Rice | nucleus | 40.2 | 34.97 |
| EES18672 | Sorghum | nucleus | 39.87 | 34.58 |
| EES03423 | Sorghum | cytosol | 36.21 | 34.38 |
| Zm00001d011571_P001 | Maize | cytosol | 35.88 | 34.29 |
| Zm00001d043902_P001 | Maize | nucleus | 36.21 | 34.28 |
| Zm00001d038994_P001 | Maize | cytosol | 38.87 | 34.11 |
| TraesCS1A01G392300.1 | Wheat | nucleus | 39.53 | 33.71 |
| PGSC0003DMT400052607 | Potato | nucleus, plastid | 44.19 | 33.5 |
| TraesCS1D01G400500.1 | Wheat | nucleus | 39.2 | 33.43 |
| TraesCS1B01G420500.1 | Wheat | nucleus | 39.2 | 33.15 |
| Os01t0674000-01 | Rice | nucleus | 36.21 | 32.83 |
| Zm00001d030350_P001 | Maize | nucleus | 22.59 | 32.38 |
| CDX98849 | Canola | cytosol | 31.56 | 30.94 |
| Solyc07g055100.2.1 | Tomato | nucleus, plastid | 43.85 | 30.77 |
| CDY61477 | Canola | nucleus, plastid | 29.9 | 29.9 |
| CDY33246 | Canola | nucleus | 30.23 | 29.74 |
| CDY02487 | Canola | nucleus, plastid | 29.9 | 29.22 |
| CDY39099 | Canola | nucleus | 30.56 | 29.02 |
| CDY39101 | Canola | nucleus, plastid | 29.24 | 28.85 |
| CDY08216 | Canola | nucleus | 30.23 | 27.74 |
| CDY51405 | Canola | nucleus | 11.63 | 27.56 |
| CDX75751 | Canola | nucleus | 31.56 | 25.54 |
| CDY26148 | Canola | nucleus, plastid | 30.23 | 25.49 |
| CDX93016 | Canola | nucleus | 15.61 | 23.74 |
| CDY33093 | Canola | cytosol, plastid | 30.23 | 20.82 |
| CDX94808 | Canola | nucleus | 20.6 | 19.31 |
Protein Annotations
| EnsemblPlants:CDX71939 | EnsemblPlantsGene:GSBRNA2T00155696001 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF2 | PFAM:PF13837 |
| ProteinID:CDX71939 | ProteinID:CDX71939.1 | SEG:seg | UniParc:UPI0004EAD5FE | MapMan:15.5.20 | : |
Description
BnaC08g29350D
Coordinates
chrLK031795:+:1397266..1398830
Molecular Weight (calculated)
33549.7 Da
IEP (calculated)
10.377
GRAVY (calculated)
-0.719
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHAVNGSFS PGSSRPSPST LSREDCWSEE ATFTLIQAWG SRYVNLSRGS LRQNHWQEVA NAVNDRHFNT GRNVSAAKSQ PSRTDVQCKN RIDTLKKKYK
101: VEKARVSGAG GSGGYVSTWP FFSDLDDLLG ETFPTSSATP SLQMTIVPVP VAPRSAIPRR PAPAPAIMRI GGDNLLGYRG NLNAFAAAAA AAASSPAYED
201: DSDGSRSRSS GGKRKREEKQ GYKEVAEAIE RLREIYERVE ERKRKEMVEL EKQRMRFAKE LECHRMQLFT EMRVRLHKLR RTKGPTSSAL GYGMMDLPSY
301: L
101: VEKARVSGAG GSGGYVSTWP FFSDLDDLLG ETFPTSSATP SLQMTIVPVP VAPRSAIPRR PAPAPAIMRI GGDNLLGYRG NLNAFAAAAA AAASSPAYED
201: DSDGSRSRSS GGKRKREEKQ GYKEVAEAIE RLREIYERVE ERKRKEMVEL EKQRMRFAKE LECHRMQLFT EMRVRLHKLR RTKGPTSSAL GYGMMDLPSY
301: L
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAAL DYGMMDFPSY F
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAAL DYGMMDFPSY F
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.