Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043902_P001 | Maize | nucleus | 42.86 | 28.3 |
| Zm00001d011571_P001 | Maize | cytosol | 42.38 | 28.25 |
| Zm00001d038994_P001 | Maize | cytosol | 39.05 | 23.91 |
| KRH11016 | Soybean | nucleus | 28.1 | 23.6 |
| Bra007407.1-P | Field mustard | nucleus, plastid | 32.38 | 23.21 |
| PGSC0003DMT400026432 | Potato | cytosol | 31.9 | 23.18 |
| CDX71939 | Canola | nucleus, plastid | 32.38 | 22.59 |
| Solyc02g076810.2.1 | Tomato | cytosol | 30.0 | 22.42 |
| KRH27047 | Soybean | nucleus | 30.95 | 21.17 |
| KRH21272 | Soybean | nucleus | 31.43 | 21.15 |
| KRH22283 | Soybean | nucleus | 30.48 | 20.91 |
| VIT_10s0003g01300.t01 | Wine grape | nucleus | 29.52 | 20.53 |
| AT3G58630.1 | Thale cress | nucleus | 30.95 | 20.25 |
| Bra003346.1-P | Field mustard | nucleus | 29.05 | 19.93 |
| CDX67755 | Canola | nucleus | 29.05 | 19.3 |
| CDX98311 | Canola | nucleus | 28.57 | 19.23 |
| Solyc12g010890.1.1 | Tomato | nucleus | 29.05 | 18.89 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 30.48 | 18.44 |
| Zm00001d010753_P001 | Maize | nucleus | 27.14 | 17.38 |
| Zm00001d025514_P001 | Maize | nucleus | 32.38 | 17.35 |
| Zm00001d003549_P001 | Maize | nucleus | 30.95 | 16.88 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 31.9 | 16.67 |
| PGSC0003DMT400020194 | Potato | plastid | 28.57 | 15.67 |
| PGSC0003DMT400052607 | Potato | nucleus, plastid | 28.1 | 14.86 |
| Solyc07g055100.2.1 | Tomato | nucleus, plastid | 29.05 | 14.22 |
| Zm00001d011730_P001 | Maize | nucleus, plastid | 21.9 | 13.14 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 29.52 | 9.34 |
Protein Annotations
| EnsemblPlants:Zm00001d030350_P001 | EnsemblPlants:Zm00001d030350_T001 | EnsemblPlantsGene:Zm00001d030350 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF33 | PFAM:PF13837 |
| ProteinID:ONM00856.1 | SEG:seg | UniParc:UPI00022082CD | UniProt:A0A1D6KC50 | MapMan:15.5.20 | : |
Description
Trihelix-transcription factor 7sequence-specific DNA binding transcription factors
Coordinates
chr1:-:124513774..124516163
Molecular Weight (calculated)
23063.2 Da
IEP (calculated)
10.597
GRAVY (calculated)
-0.796
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGKLPPPNP NLAYWEDCWS EGEKVALVDA WGSRYLDLNR GSLRQPQWRE VADAVNSRPG ASARRCLPRT DIQCKNRVDT LKKKYKVEWP RSRTGMSSPT
101: SRGSQGMGGQ CTASTTVDRL PLSASGDGAM DFIGFHATPT LVIQATRLAE DLFERASNGS GKCLTSRVTH AALPVFRRGR RPRGVWGRRG EGRGHKMDGP
201: GSSHRTDGPD
101: SRGSQGMGGQ CTASTTVDRL PLSASGDGAM DFIGFHATPT LVIQATRLAE DLFERASNGS GKCLTSRVTH AALPVFRRGR RPRGVWGRRG EGRGHKMDGP
201: GSSHRTDGPD
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.