Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21272 | Soybean | nucleus | 67.22 | 65.06 |
| Solyc02g076810.2.1 | Tomato | cytosol | 59.27 | 63.7 |
| PGSC0003DMT400026432 | Potato | cytosol | 60.26 | 62.98 |
| KRH11016 | Soybean | nucleus | 49.01 | 59.2 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 50.33 | 58.46 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 47.02 | 57.49 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 50.0 | 55.93 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 44.04 | 52.78 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 55.96 | 48.7 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 41.06 | 48.63 |
| VIT_08s0058g00200.t01 | Wine grape | nucleus | 38.08 | 45.28 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 42.72 | 40.44 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 42.38 | 40.25 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 42.38 | 40.25 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 42.05 | 40.19 |
| Zm00001d011571_P001 | Maize | cytosol | 41.06 | 39.37 |
| Os05t0560600-01 | Rice | nucleus | 44.7 | 39.02 |
| Zm00001d043902_P001 | Maize | nucleus | 40.73 | 38.68 |
| EES03423 | Sorghum | cytosol | 40.4 | 38.49 |
| Os01t0674000-01 | Rice | nucleus | 41.39 | 37.65 |
| EES18672 | Sorghum | nucleus | 42.38 | 36.89 |
| Zm00001d038994_P001 | Maize | cytosol | 41.72 | 36.73 |
| TraesCS1D01G400500.1 | Wheat | nucleus | 42.05 | 35.98 |
| TraesCS1B01G420500.1 | Wheat | nucleus | 42.05 | 35.67 |
| TraesCS1A01G392300.1 | Wheat | nucleus | 41.39 | 35.41 |
| Zm00001d030350_P001 | Maize | nucleus | 20.53 | 29.52 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 35.43 | 29.4 |
| VIT_11s0016g04130.t01 | Wine grape | nucleus | 29.14 | 24.04 |
| VIT_09s0002g04700.t01 | Wine grape | nucleus | 27.48 | 19.67 |
Protein Annotations
| EntrezGene:100260025 | wikigene:100260025 | MapMan:15.5.20 | EMBL:AM431007 | ProteinID:CAN64751 | ProteinID:CAN64751.1 |
| ProteinID:CCB55686 | ProteinID:CCB55686.1 | ncoils:Coil | UniProt:F6HM98 | EMBL:FN595992 | EntrezGene:LOC100260025 |
| wikigene:LOC100260025 | PFAM:PF13837 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF16 | TIGR:TC66198 | UniParc:UPI0002107FB9 |
| ArrayExpress:VIT_10s0003g01300 | EnsemblPlantsGene:VIT_10s0003g01300 | EnsemblPlants:VIT_10s0003g01300.t01 | unigene:Vvi.9457 | RefSeq:XP_002273017 | RefSeq:XP_002273017.2 |
| RefSeq:XP_010655521.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:2636699..2639270
Molecular Weight (calculated)
34232.2 Da
IEP (calculated)
8.181
GRAVY (calculated)
-0.782
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLTDSLPP STAPQRSAPF REDCWSEDAT STLVDAWGRR YIELNRGNLR QKDWQEVADA VNARHGHVKK ARRTDVQCKN RIDTIKKKYK IEKARVTTSN
101: GALTSSWPFF SRLDALIGPT LSAKKPSSAS PPLALPLPYW KTPSPAAPSA SVGALPQKRP MPAVDDSYFR RNYSAVAAAA AAEAVDEDED EEEEEEESRW
201: SAERSGDVDG MRQLARAIER FGEIYEKVEA EKQKQMFELE KQRMQFAKDV EFQRMKMFMD TQVQLEKIKR AKRSGLNDSE AVNNFSLLYN SGGLTPWWLH
301: KL
101: GALTSSWPFF SRLDALIGPT LSAKKPSSAS PPLALPLPYW KTPSPAAPSA SVGALPQKRP MPAVDDSYFR RNYSAVAAAA AAEAVDEDED EEEEEEESRW
201: SAERSGDVDG MRQLARAIER FGEIYEKVEA EKQKQMFELE KQRMQFAKDV EFQRMKMFMD TQVQLEKIKR AKRSGLNDSE AVNNFSLLYN SGGLTPWWLH
301: KL
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.