Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03423 | Sorghum | cytosol | 93.65 | 93.06 |
| Zm00001d043902_P001 | Maize | nucleus | 91.75 | 90.88 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 81.59 | 81.33 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 80.95 | 80.19 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 80.95 | 80.19 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 80.63 | 79.62 |
| Os01t0674000-01 | Rice | nucleus | 77.14 | 73.19 |
| Zm00001d038994_P001 | Maize | cytosol | 62.86 | 57.73 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 40.95 | 51.19 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 41.27 | 50.0 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 40.0 | 49.41 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 42.22 | 49.26 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 38.1 | 48.58 |
| Zm00001d030350_P001 | Maize | nucleus | 28.25 | 42.38 |
| VIT_10s0003g01300.t01 | Wine grape | nucleus | 39.37 | 41.06 |
| KRH27047 | Soybean | nucleus | 39.05 | 40.07 |
| KRH21272 | Soybean | nucleus | 39.37 | 39.74 |
| KRH22283 | Soybean | nucleus | 37.78 | 38.89 |
| Solyc02g076810.2.1 | Tomato | cytosol | 34.6 | 38.79 |
| PGSC0003DMT400026432 | Potato | cytosol | 35.24 | 38.41 |
| Bra007407.1-P | Field mustard | nucleus, plastid | 34.92 | 37.54 |
| KRH11016 | Soybean | nucleus | 29.21 | 36.8 |
| CDX98311 | Canola | nucleus | 35.87 | 36.22 |
| Bra003346.1-P | Field mustard | nucleus | 34.92 | 35.95 |
| Solyc12g010890.1.1 | Tomato | nucleus | 36.83 | 35.91 |
| CDX71939 | Canola | nucleus, plastid | 34.29 | 35.88 |
| CDX67755 | Canola | nucleus | 35.56 | 35.44 |
| AT3G58630.1 | Thale cress | nucleus | 35.24 | 34.58 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 34.6 | 31.41 |
| PGSC0003DMT400020194 | Potato | plastid | 36.19 | 29.77 |
| PGSC0003DMT400052607 | Potato | nucleus, plastid | 36.19 | 28.72 |
| Zm00001d003549_P001 | Maize | nucleus | 33.33 | 27.27 |
| Solyc07g055100.2.1 | Tomato | nucleus, plastid | 37.14 | 27.27 |
| Zm00001d025514_P001 | Maize | nucleus | 33.02 | 26.53 |
| Zm00001d010753_P001 | Maize | nucleus | 26.35 | 25.3 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 30.48 | 23.88 |
| Zm00001d011730_P001 | Maize | nucleus, plastid | 21.27 | 19.14 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 27.3 | 12.95 |
Protein Annotations
| EnsemblPlants:Zm00001d011571_P001 | EnsemblPlants:Zm00001d011571_T001 | EnsemblPlantsGene:Zm00001d011571 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF33 |
| PFAM:PF13837 | ProteinID:AQK97262.1 | SEG:seg | UniParc:UPI00022108EF | UniProt:K7VKJ4 | MapMan:15.5.20 |
Description
Trihelix-transcription factor 146b-interacting protein 1
Coordinates
chr8:-:154708719..154709666
Molecular Weight (calculated)
34674.8 Da
IEP (calculated)
10.396
GRAVY (calculated)
-0.824
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGKLPPPNP NLPYREDCWS EGETAALVDA WGSRYLDLNR GSLRQPQWRE VADAVNSRPG ASARGRPPRT DIQCKNRVDT LKKKYKAERA RGGPSPWSFY
101: GQLDILVGPT LNGTKKPSPP RAALPVFRRR QTPPRSPSPQ SPPPLPVALP LHNYRRGSDL PSANFIHKAA AAAAAAAAAA ESDSEDGYNN NEYDDDEGSQ
201: QSPSRSVSSR SGGAPAVGTK RKRRSGSGGF GELARAIETF ADMYERMEAA KQRHAEEMER QRIKFLKDLE LKRMRSFVDM QLQLSRAKHA RKGDASSEML
301: MSLAALPFLS SSAYL
101: GQLDILVGPT LNGTKKPSPP RAALPVFRRR QTPPRSPSPQ SPPPLPVALP LHNYRRGSDL PSANFIHKAA AAAAAAAAAA ESDSEDGYNN NEYDDDEGSQ
201: QSPSRSVSSR SGGAPAVGTK RKRRSGSGGF GELARAIETF ADMYERMEAA KQRHAEEMER QRIKFLKDLE LKRMRSFVDM QLQLSRAKHA RKGDASSEML
301: MSLAALPFLS SSAYL
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.