Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11016 | Soybean | nucleus | 70.83 | 88.4 |
| Solyc02g076810.2.1 | Tomato | cytosol | 60.9 | 67.62 |
| VIT_10s0003g01300.t01 | Wine grape | nucleus | 65.06 | 67.22 |
| PGSC0003DMT400026432 | Potato | cytosol | 60.58 | 65.4 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 45.83 | 55.0 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 46.15 | 53.33 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 41.99 | 53.04 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 41.99 | 51.98 |
| KRH27047 | Soybean | nucleus | 50.96 | 51.79 |
| KRH22283 | Soybean | nucleus | 49.68 | 50.65 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 40.06 | 49.02 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 41.03 | 40.25 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 41.03 | 40.25 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 40.38 | 39.87 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 40.71 | 39.81 |
| Zm00001d011571_P001 | Maize | cytosol | 39.74 | 39.37 |
| Zm00001d043902_P001 | Maize | nucleus | 39.74 | 38.99 |
| EES03423 | Sorghum | cytosol | 39.42 | 38.8 |
| Os05t0560600-01 | Rice | nucleus | 42.31 | 38.15 |
| Os01t0674000-01 | Rice | nucleus | 39.1 | 36.75 |
| EES18672 | Sorghum | nucleus | 40.71 | 36.6 |
| Zm00001d038994_P001 | Maize | cytosol | 39.74 | 36.15 |
| TraesCS1D01G400500.1 | Wheat | nucleus | 40.38 | 35.69 |
| TraesCS1A01G392300.1 | Wheat | nucleus | 39.74 | 35.13 |
| TraesCS1B01G420500.1 | Wheat | nucleus | 40.06 | 35.11 |
| Zm00001d030350_P001 | Maize | nucleus | 21.15 | 31.43 |
| KRH47662 | Soybean | nucleus, plastid | 35.9 | 30.43 |
| KRH06239 | Soybean | nucleus | 34.62 | 29.19 |
| KRH48419 | Soybean | nucleus | 23.4 | 20.28 |
| KRH23479 | Soybean | nucleus | 22.44 | 18.23 |
| KRH39263 | Soybean | nucleus | 23.08 | 18.14 |
| KRH09846 | Soybean | nucleus | 23.08 | 18.14 |
Protein Annotations
| EMBL:ACUP02008352 | EnsemblPlants:KRH21272 | EnsemblPlantsGene:GLYMA_13G229600 | EntrezGene:100815241 | ncoils:Coil | PANTHER:PTHR31307 |
| PANTHER:PTHR31307:SF16 | PFAM:PF13837 | ProteinID:KRH21272 | ProteinID:KRH21272.1 | SEG:seg | UniParc:UPI000233AC65 |
| UniProt:I1M1T8 | MapMan:15.5.20 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:34169980..34175488
Molecular Weight (calculated)
35361.0 Da
IEP (calculated)
4.789
GRAVY (calculated)
-0.996
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDFHDSLLT TTPPPSRPVP VREDCWSEEA SSTLVDAWGR RYLELNRGNL RQKDWQDVAD AVNALHGHTK KTHRTDVQCK NRIDTIKKKY KIEKARVSAS
101: NGTLSSSWPF YERLDALIGP NFSAKKSTSS PSPSPPVALP LLPHRKNQNQ NQNPSSSPAI AVPPTAVALP QKRSSAAAMD EGYFRRNYSA VAAAAAAAEA
201: DEDDEEEDEE EAEDLEEEEE EECEEEGRGS EVEEGDKERE GMRRLAKAIE RFGEVYERVE AQKLRQMVDL EKQRMQFAKD LEVQRMEMFM DTQVQLERIK
301: RGKRSGSNDM YS
101: NGTLSSSWPF YERLDALIGP NFSAKKSTSS PSPSPPVALP LLPHRKNQNQ NQNPSSSPAI AVPPTAVALP QKRSSAAAMD EGYFRRNYSA VAAAAAAAEA
201: DEDDEEEDEE EAEDLEEEEE EECEEEGRGS EVEEGDKERE GMRRLAKAIE RFGEVYERVE AQKLRQMVDL EKQRMQFAKD LEVQRMEMFM DTQVQLERIK
301: RGKRSGSNDM YS
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.