CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043902_P001	Maize	nucleus	94.64	94.34
Zm00001d011571_P001	Maize	cytosol	93.06	93.65
HORVU3Hr1G061870.1	Barley	nucleus	82.02	82.28
TraesCS3D01G271000.1	Wheat	nucleus	81.07	80.82
TraesCS3A01G271400.1	Wheat	nucleus	81.07	80.82
TraesCS3B01G305100.1	Wheat	nucleus	80.76	80.25
Os01t0674000-01	Rice	nucleus	77.92	74.4
EES18672	Sorghum	nucleus	63.09	57.64
GSMUA_Achr5P09160_001	Banana	nucleus	41.64	52.38
GSMUA_Achr6P26840_001	Banana	cytosol, mitochondrion, nucleus	41.64	50.77
GSMUA_Achr9P06410_001	Banana	nucleus	42.9	50.37
GSMUA_Achr1P27460_001	Banana	nucleus	40.38	50.2
GSMUA_Achr1P11500_001	Banana	nucleus	38.8	49.8
VIT_10s0003g01300.t01	Wine grape	nucleus	38.49	40.4
Solyc02g076810.2.1	Tomato	cytosol	35.33	39.86
PGSC0003DMT400026432	Potato	cytosol	35.96	39.45
KRH21272	Soybean	nucleus	38.8	39.42
KRH27047	Soybean	nucleus	37.85	39.09
KRH22283	Soybean	nucleus	36.59	37.91
Bra007407.1-P	Field mustard	nucleus, plastid	34.38	37.2
CDX98311	Canola	nucleus	35.96	36.54
KRH11016	Soybean	nucleus	28.71	36.4
Solyc12g010890.1.1	Tomato	nucleus	36.91	36.22
CDX71939	Canola	nucleus, plastid	34.38	36.21
Bra003346.1-P	Field mustard	nucleus	34.38	35.62
CDX67755	Canola	nucleus	35.33	35.44
AT3G58630.1	Thale cress	nucleus	34.7	34.27
VIT_12s0028g02150.t01	Wine grape	cytosol	34.7	31.7
PGSC0003DMT400020194	Potato	plastid	36.28	30.03
PGSC0003DMT400052607	Potato	nucleus, plastid	35.96	28.72
Solyc07g055100.2.1	Tomato	nucleus, plastid	36.59	27.04
EES12241	Sorghum	nucleus	33.12	25.74
KXG30464	Sorghum	nucleus, plastid	29.34	22.04
OQU87430	Sorghum	nucleus, plastid	21.77	19.66

Protein Annotations

EnsemblPlants:EES03423	EnsemblPlantsGene:SORBI_3003G253500	EntrezGene:8068003	ncoils:Coil	PANTHER:PTHR31307	PANTHER:PTHR31307:SF33
PFAM:PF13837	ProteinID:EES03423	ProteinID:EES03423.1	RefSeq:XP_002458303.1	SEG:seg	UniParc:UPI0001A84B04
UniProt:C5XG36	MapMan:15.5.20	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:59214043..59217830

Molecular Weight (calculated)

34639.9 Da

IEP (calculated)

10.156

GRAVY (calculated)

-0.725

Length

317 amino acids

Sequence
(BLAST)

001: MDGKLPPPNP NLPYREDCWS EGETAALVDA WGSRYLDLNR GSLRQPQWRE VADAVNSRPG ASARRRPPRT DIQCKNRVDT LKKKYKAERA RGGPSPWAFY
101: GQLDLLVGPT LTGSKKPSPP RAALPVFRRR QTPPRSPSPQ SPPPLPMALP LHNYRRGSDL PSANLIHKAA AAAAAAAAES DSEDGYNNND YDDDEGSQQS
201: PSRSVSSGSG AAAAAAPAVG SKRKMISGSG GFGELARAIE TFADMYERME AAKQRHAEEM ERQRIKFLKD LELKRMQAFV DMQLQLARAK HARKGDASSE
301: MLMSLAALPF LSSPAYL

Best Arabidopsis Sequence Match ( AT3G58630.2 )
(BLAST)

001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T

Arabidopsis Description

Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.