Factsheet for TraesCS3D01G271000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G271400.1	Wheat	nucleus	99.06	99.06
TraesCS3B01G305100.1	Wheat	nucleus	99.06	98.75
HORVU3Hr1G061870.1	Barley	nucleus	96.23	96.84
EES03423	Sorghum	cytosol	80.82	81.07
Zm00001d011571_P001	Maize	cytosol	80.19	80.95
Zm00001d043902_P001	Maize	nucleus	79.87	79.87
Os01t0674000-01	Rice	nucleus	82.08	78.61
TraesCS1D01G400500.1	Wheat	nucleus	68.24	61.47
GSMUA_Achr6P26840_001	Banana	cytosol, mitochondrion, nucleus	43.08	52.69
GSMUA_Achr5P09160_001	Banana	nucleus	41.51	52.38
GSMUA_Achr1P11500_001	Banana	nucleus	39.62	51.01
GSMUA_Achr9P06410_001	Banana	nucleus	43.08	50.74
GSMUA_Achr1P27460_001	Banana	nucleus	39.62	49.41
VIT_10s0003g01300.t01	Wine grape	nucleus	40.25	42.38
KRH27047	Soybean	nucleus	39.62	41.04
KRH21272	Soybean	nucleus	40.25	41.03
Solyc02g076810.2.1	Tomato	cytosol	36.16	40.93
KRH22283	Soybean	nucleus	38.36	39.87
PGSC0003DMT400026432	Potato	cytosol	36.16	39.79
Bra007407.1-P	Field mustard	nucleus, plastid	35.85	38.91
CDX71939	Canola	nucleus, plastid	36.16	38.21
CDX98311	Canola	nucleus	37.11	37.82
KRH11016	Soybean	nucleus	29.56	37.6
Bra003346.1-P	Field mustard	nucleus	35.85	37.25
Solyc12g010890.1.1	Tomato	nucleus	37.74	37.15
CDX67755	Canola	nucleus	36.79	37.03
AT3G58630.1	Thale cress	nucleus	35.85	35.51
VIT_12s0028g02150.t01	Wine grape	cytosol	34.59	31.7
PGSC0003DMT400020194	Potato	plastid	37.42	31.07
PGSC0003DMT400052607	Potato	nucleus, plastid	37.11	29.72
Solyc07g055100.2.1	Tomato	nucleus, plastid	36.48	27.04
TraesCS2D01G311800.1	Wheat	nucleus, plastid	33.65	25.91
TraesCS6D01G184500.2	Wheat	nucleus	31.45	24.04
TraesCS3D01G246100.1	Wheat	nucleus, plastid	19.18	19.3

Protein Annotations

EnsemblPlants:TraesCS3D01G271000.1	EnsemblPlantsGene:TraesCS3D01G271000	ncoils:Coil	PANTHER:PTHR31307	PANTHER:PTHR31307:SF33	PFAM:PF13837
SEG:seg	MapMan:15.5.20	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:375722382..375723338

Molecular Weight (calculated)

34609.0 Da

IEP (calculated)

10.302

GRAVY (calculated)

-0.778

Length

318 amino acids

Sequence
(BLAST)

001: MDGKLPPPNP NLPYREDCWS EGETAALVDA WGSRYIDLNR GSLRQPQWRE VADAVNTRPG ASARRRPPRT DIQCKNRVDT LKKKYKAERA RGGPSPWPFY
101: RQLDVLVGPT LSAAAAAKKP SPPRALPMLR RRMSPSRSPS PPSPAPPMAL PLPNYRRGSN LPAADLFHKA AAAAAAADSD SDDGYNNNNY DDDEGSQQSA
201: SRSVSSHSGG NGPVLGGGGG GGGGNKRKRG GTGGFGELAM AMETFAEMYE RMEAAKQRHA EEMEKQRIKF LKDLELKRMQ AFVDMQLQLS RVKQAKNGTS
301: EMLMSLAALP FLSNPAYL

Best Arabidopsis Sequence Match ( AT3G58630.1 )
(BLAST)

001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAAL DYGMMDFPSY F

Arabidopsis Description

Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.