Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03423 | Sorghum | cytosol | 94.34 | 94.64 |
| Zm00001d011571_P001 | Maize | cytosol | 90.88 | 91.75 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 81.13 | 81.65 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 80.19 | 80.19 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 79.87 | 79.87 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 79.87 | 79.62 |
| Os01t0674000-01 | Rice | nucleus | 76.42 | 73.19 |
| Zm00001d038994_P001 | Maize | cytosol | 61.32 | 56.85 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 41.2 | 51.98 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 41.51 | 50.77 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 42.45 | 50.0 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 39.94 | 49.8 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 38.68 | 49.8 |
| Zm00001d030350_P001 | Maize | nucleus | 28.3 | 42.86 |
| VIT_10s0003g01300.t01 | Wine grape | nucleus | 38.68 | 40.73 |
| KRH21272 | Soybean | nucleus | 38.99 | 39.74 |
| Solyc02g076810.2.1 | Tomato | cytosol | 34.59 | 39.15 |
| KRH27047 | Soybean | nucleus | 37.74 | 39.09 |
| PGSC0003DMT400026432 | Potato | cytosol | 35.22 | 38.75 |
| KRH22283 | Soybean | nucleus | 36.48 | 37.91 |
| Bra007407.1-P | Field mustard | nucleus, plastid | 34.59 | 37.54 |
| KRH11016 | Soybean | nucleus | 29.25 | 37.2 |
| CDX98311 | Canola | nucleus | 35.85 | 36.54 |
| CDX71939 | Canola | nucleus, plastid | 34.28 | 36.21 |
| Bra003346.1-P | Field mustard | nucleus | 34.59 | 35.95 |
| Solyc12g010890.1.1 | Tomato | nucleus | 36.48 | 35.91 |
| CDX67755 | Canola | nucleus | 35.22 | 35.44 |
| AT3G58630.1 | Thale cress | nucleus | 35.22 | 34.89 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 34.28 | 31.41 |
| PGSC0003DMT400020194 | Potato | plastid | 36.16 | 30.03 |
| PGSC0003DMT400052607 | Potato | nucleus, plastid | 35.53 | 28.46 |
| Zm00001d003549_P001 | Maize | nucleus | 32.7 | 27.01 |
| Solyc07g055100.2.1 | Tomato | nucleus, plastid | 36.16 | 26.81 |
| Zm00001d025514_P001 | Maize | nucleus | 32.39 | 26.28 |
| Zm00001d010753_P001 | Maize | nucleus | 27.04 | 26.22 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 29.87 | 23.63 |
| Zm00001d011730_P001 | Maize | nucleus, plastid | 21.07 | 19.14 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 27.99 | 13.4 |
Protein Annotations
| EnsemblPlants:Zm00001d043902_P001 | EnsemblPlants:Zm00001d043902_T001 | EnsemblPlantsGene:Zm00001d043902 | EntrezGene:103651369 | ncoils:Coil | PANTHER:PTHR31307 |
| PANTHER:PTHR31307:SF33 | PFAM:PF13837 | ProteinID:AIB05346.1 | ProteinID:ONM39394.1 | SEG:seg | UniParc:UPI000221ABF9 |
| UniProt:A0A060CXU7 | MapMan:15.5.20 | : | : | : | : |
Description
Trihelix-transcription factor 17sequence-specific DNA binding transcription factors
Coordinates
chr3:+:213345213..213346432
Molecular Weight (calculated)
34725.9 Da
IEP (calculated)
10.067
GRAVY (calculated)
-0.750
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGKLPPPNP NLPYREDCWS EGETAALVDA WGSRYLDLNR GSLRQPQWRE VADAVNSRPG ASARRRPPRT DIQCKNRVDT LKKKYKAERA RGGPSQWNFY
101: AQLDLLVGPT LTGIKKPSPP RAALPVFRRR LTPPRSPSPQ SPPPLPVALP LHNYRRGSDL PSANLIHKAA AAAAAAAAES DSEDGYNNND YDDDEGSQQS
201: PSRSVSSGFG GGGGGAPPAV GSKRKMSSGS GGFGELARAI ETFADMYERM EAAKQQHAEE MERQRIKFLK DLELKRMQAF VDMQLQLART KHARKGDASS
301: DTLMSLAALP FLSSPAYL
101: AQLDLLVGPT LTGIKKPSPP RAALPVFRRR LTPPRSPSPQ SPPPLPVALP LHNYRRGSDL PSANLIHKAA AAAAAAAAES DSEDGYNNND YDDDEGSQQS
201: PSRSVSSGFG GGGGGAPPAV GSKRKMSSGS GGFGELARAI ETFADMYERM EAAKQQHAEE MERQRIKFLK DLELKRMQAF VDMQLQLART KHARKGDASS
301: DTLMSLAALP FLSSPAYL
001: METTTPQSKS SVSHRPPLGR EDWWSEEATA TLVEAWGNRY VKLNHGNLRQ NDWKDVADAV NSRHGDNSRK KTDLQCKNRV DTLKKKYKTE KAKLSPSTWR
101: FYNRLDVLIG PVVKKSAGGV VKSAPFKNHL NPTGSNSTGS SLEDDDEDDD EVGDWEFVAR KHPRVEEVDL SEGSTCRELA TAILKFGEVY ERIEGKKQQM
201: MIELEKQRME VTKEVELKRM NMLMEMQLEI EKSKHRKRAS ASGKQL
101: FYNRLDVLIG PVVKKSAGGV VKSAPFKNHL NPTGSNSTGS SLEDDDEDDD EVGDWEFVAR KHPRVEEVDL SEGSTCRELA TAILKFGEVY ERIEGKKQQM
201: MIELEKQRME VTKEVELKRM NMLMEMQLEI EKSKHRKRAS ASGKQL
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:F4K0Q7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.