Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026432 | Potato | cytosol | 94.31 | 91.7 |
| KRH21272 | Soybean | nucleus | 67.62 | 60.9 |
| VIT_10s0003g01300.t01 | Wine grape | nucleus | 63.7 | 59.27 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 48.75 | 52.69 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 46.26 | 52.63 |
| KRH11016 | Soybean | nucleus | 45.2 | 50.8 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 45.55 | 50.79 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 48.75 | 50.74 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 40.93 | 45.1 |
| Solyc06g051120.2.1 | Tomato | nucleus | 38.43 | 42.19 |
| Solyc12g010890.1.1 | Tomato | nucleus | 48.4 | 42.11 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 40.93 | 36.39 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 41.28 | 36.36 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 40.93 | 36.16 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 40.93 | 36.16 |
| EES03423 | Sorghum | cytosol | 39.86 | 35.33 |
| Zm00001d011571_P001 | Maize | cytosol | 38.79 | 34.6 |
| Zm00001d043902_P001 | Maize | nucleus | 39.15 | 34.59 |
| Os05t0560600-01 | Rice | nucleus | 41.99 | 34.1 |
| EES18672 | Sorghum | nucleus | 41.64 | 33.72 |
| Zm00001d038994_P001 | Maize | cytosol | 40.93 | 33.53 |
| TraesCS1D01G400500.1 | Wheat | nucleus | 41.64 | 33.14 |
| Os01t0674000-01 | Rice | nucleus | 39.15 | 33.13 |
| TraesCS1A01G392300.1 | Wheat | nucleus | 41.28 | 32.86 |
| TraesCS1B01G420500.1 | Wheat | nucleus | 40.93 | 32.3 |
| Solyc07g055100.2.1 | Tomato | nucleus, plastid | 46.98 | 30.77 |
| Zm00001d030350_P001 | Maize | nucleus | 22.42 | 30.0 |
| Solyc03g122030.1.1 | Tomato | nucleus | 37.37 | 28.93 |
| Solyc05g018350.2.1 | Tomato | nucleus | 28.11 | 22.38 |
| Solyc12g043090.1.1 | Tomato | nucleus | 28.47 | 21.33 |
Protein Annotations
| EnsemblPlants:Solyc02g076810.2.1 | EnsemblPlantsGene:Solyc02g076810.2 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF16 | PFAM:PF13837 | SEG:seg |
| UniParc:UPI000276793D | UniProt:K4B8Q8 | MapMan:15.5.20 | : | : | : |
Description
No Description!
Coordinates
chr2:+:41921504..41925184
Molecular Weight (calculated)
32455.6 Da
IEP (calculated)
5.831
GRAVY (calculated)
-0.745
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEITESSTQ VTMSSRPLPF REDCWSEQAT WTLVDAWGRR YMELNRGNLR QKDWQRVSDS VNALHGHSRK THRTDVQCKN RIDTLKKKYK VEKAKIIESN
101: GTLTSSWPFF ERLDMLIENS DKKVTPVMVS LLPLPMSSPP MGVPLPYRRS AVVTPVSLPQ KRQLPAFDES CFRRNYSAVA AAAAAGGGEE DYDDEEEDVE
201: MTEESWEEDG MRRLAKAIES FGEIYERVEG MKQRQMVELE KQRMQFAKDL EVQRMQLFMD TQVQLEKIKH TKLSGSNDLY S
101: GTLTSSWPFF ERLDMLIENS DKKVTPVMVS LLPLPMSSPP MGVPLPYRRS AVVTPVSLPQ KRQLPAFDES CFRRNYSAVA AAAAAGGGEE DYDDEEEDVE
201: MTEESWEEDG MRRLAKAIES FGEIYERVEG MKQRQMVELE KQRMQFAKDL EVQRMQLFMD TQVQLEKIKH TKLSGSNDLY S
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.