Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67755 | Canola | nucleus | 98.04 | 94.94 |
| CDX98311 | Canola | nucleus | 93.14 | 91.35 |
| Bra007407.1-P | Field mustard | nucleus, plastid | 79.41 | 82.94 |
| AT3G58630.1 | Thale cress | nucleus | 80.39 | 76.64 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 41.5 | 48.85 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 39.22 | 48.58 |
| KRH27047 | Soybean | nucleus | 48.04 | 47.88 |
| KRH22283 | Soybean | nucleus | 47.06 | 47.06 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 38.56 | 46.83 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 41.18 | 46.67 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 36.6 | 43.92 |
| Solyc12g010890.1.1 | Tomato | nucleus | 45.42 | 43.03 |
| Bra034866.1-P | Field mustard | nucleus | 33.01 | 38.7 |
| Bra009119.1-P | Field mustard | nucleus | 31.7 | 38.65 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 43.14 | 38.04 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 37.58 | 36.39 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 37.58 | 36.05 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 37.25 | 35.85 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 37.25 | 35.85 |
| Os05t0560600-01 | Rice | nucleus | 40.2 | 35.55 |
| PGSC0003DMT400020194 | Potato | plastid | 44.44 | 35.51 |
| Zm00001d011571_P001 | Maize | cytosol | 35.95 | 34.92 |
| Bra034165.1-P | Field mustard | nucleus | 31.37 | 34.78 |
| Zm00001d043902_P001 | Maize | nucleus | 35.95 | 34.59 |
| EES18672 | Sorghum | nucleus | 39.22 | 34.58 |
| TraesCS1A01G392300.1 | Wheat | nucleus | 39.87 | 34.56 |
| Zm00001d038994_P001 | Maize | cytosol | 38.56 | 34.4 |
| EES03423 | Sorghum | cytosol | 35.62 | 34.38 |
| TraesCS1D01G400500.1 | Wheat | nucleus | 39.54 | 34.28 |
| TraesCS1B01G420500.1 | Wheat | nucleus | 39.54 | 33.99 |
| PGSC0003DMT400052607 | Potato | nucleus, plastid | 43.14 | 33.25 |
| Os01t0674000-01 | Rice | nucleus | 35.95 | 33.13 |
| Solyc07g055100.2.1 | Tomato | nucleus, plastid | 43.14 | 30.77 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 30.07 | 29.68 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 28.76 | 29.24 |
| Bra021536.1-P | Field mustard | nucleus | 29.09 | 29.09 |
| Zm00001d030350_P001 | Maize | nucleus | 19.93 | 29.05 |
| Bra030909.1-P | Field mustard | nucleus | 11.76 | 28.12 |
| Bra014370.1-P | Field mustard | nucleus | 30.07 | 27.46 |
| Bra001951.1-P | Field mustard | nucleus | 21.57 | 19.47 |
Protein Annotations
Description
AT3G58630 (E=2e-089) | transcription factor
Coordinates
chrA07:-:12722152..12723072
Molecular Weight (calculated)
34350.2 Da
IEP (calculated)
9.973
GRAVY (calculated)
-0.845
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDAVNDSFS PGSSRPSPSM LSREDYWSEE ATFTLIQAWG RRYVDLSRGG LRQKHWQEVA NAVNDRHFNT GRNVSAAKSQ PYRTDVQCKN RIDTLKKKYK
101: VEKARVSSES YVSAWPFFSD LDELLRETFP ATSSAGPDNS QRPSPSLPIV PVPVAPRSAI SRRPAPAIMS LGGDNLLGFR GNLNAFAAAA AAAASPAYED
201: DSDGSRSRSS GGNNRKRERE VEIEIEEKKG YKEVAEAIER FGKIYEKVEE RKRKEMVELE KQRMRFAKEL ECHRMQLFTE MQVRLHKLRR SSGSNGPTSS
301: ANAGEP
101: VEKARVSSES YVSAWPFFSD LDELLRETFP ATSSAGPDNS QRPSPSLPIV PVPVAPRSAI SRRPAPAIMS LGGDNLLGFR GNLNAFAAAA AAAASPAYED
201: DSDGSRSRSS GGNNRKRERE VEIEIEEKKG YKEVAEAIER FGKIYEKVEE RKRKEMVELE KQRMRFAKEL ECHRMQLFTE MQVRLHKLRR SSGSNGPTSS
301: ANAGEP
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.