Factsheet for Bra014370.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000622.1-P
Bra001302.1-P
Bra003473.1-P
Bra004190.1-P
Bra005022.1-P
Bra005553.1-P
Bra005749.1-P
Bra008624.1-P
Bra009560.1-P
Bra010051.1-P
Bra011329.1-P
Bra011460.1-P
Bra012670.1-P
Bra013976.1-P
Bra014187.1-P
Bra014421.1-P
Bra015090.1-P
Bra017058.1-P
Bra018237.1-P
Bra023619.1-P
Bra025379.1-P
Bra025492.1-P
Bra026241.1-P
Bra027911.1-P
Bra029780.1-P
Bra033088.1-P
Bra034075.1-P
Bra037927.1-P
Bra038147.1-P
Bra039964.1-P
Bra040630.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54060.1	Bra014187.1-P	AT1G49410.1	21798944
AT1G54060.1	Bra027911.1-P	AT1G57620.1	21798944
AT1G54060.1	Bra038147.1-P	AT1G57620.1	21798944
AT1G54060.1	Bra004190.1-P	AT1G66820.1	21798944
AT1G54060.1	Bra040630.1-P	AT1G66820.1	21798944
AT1G54060.1	Bra039964.1-P	AT2G29125.1	21798944
AT1G54060.1	Bra018237.1-P	AT2G31490.1	21798944
AT1G54060.1	Bra005553.1-P	AT2G32840.1	21798944
AT1G54060.1	Bra005022.1-P	AT2G39705.1	21798944
AT1G54060.1	Bra017058.1-P	AT2G39705.1	21798944
AT1G54060.1	Bra001302.1-P	AT3G09630.1	21798944
AT1G54060.1	Bra029780.1-P	AT3G09630.1	21798944
AT1G54060.1	Bra034075.1-P	AT3G09630.1	21798944
AT1G54060.1	Bra015090.1-P	AT3G24860.1	21798944
AT1G54060.1	Bra025379.1-P	AT3G29160.1	21798944
AT1G54060.1	Bra033088.1-P	AT3G29160.1	21798944
AT1G54060.1	Bra003473.1-P	AT3G61790.1	21798944
AT1G54060.1	Bra014421.1-P	AT3G61790.1	21798944
AT1G54060.1	Bra012670.1-P	AT4G17270.1	21798944
AT1G54060.1	Bra026241.1-P	AT4G17270.1	21798944
AT1G54060.1	Bra011329.1-P	AT4G32260.1	21798944
AT1G54060.1	Bra011460.1-P	AT4G33666.1	21798944
AT1G54060.1	Bra005749.1-P	AT5G02870.1	21798944
AT1G54060.1	Bra009560.1-P	AT5G02870.1	21798944
AT1G54060.1	Bra008624.1-P	AT5G16320.1	21798944
AT1G54060.1	Bra013976.1-P	AT5G17450.1	21798944
AT1G54060.1	Bra023619.1-P	AT5G17450.1	21798944
AT1G54060.1	Bra025492.1-P	AT5G41520.1	21798944
AT1G54060.1	Bra037927.1-P	AT5G50335.1	21798944
AT1G54060.1	Bra000622.1-P	AT5G60160.1	21798944
AT1G54060.1	Bra010051.1-P	AT5G62030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08216	Canola	nucleus	96.72	98.78
Bra030909.1-P	Field mustard	nucleus	31.34	82.03
Bra037960.1-P	Field mustard	nucleus, plastid	73.13	81.4
AT1G54060.1	Thale cress	nucleus	77.31	67.62
Bra021534.1-P	Field mustard	nucleus, plastid	39.4	42.58
Bra021536.1-P	Field mustard	nucleus	37.91	41.5
KRH06239	Soybean	nucleus	42.69	38.65
Solyc03g122030.1.1	Tomato	nucleus	41.79	38.57
KRH47662	Soybean	nucleus, plastid	42.09	38.32
VIT_09s0002g00720.t01	Wine grape	nucleus	41.49	38.19
PGSC0003DMT400088401	Potato	nucleus, plastid	41.79	37.53
Bra034866.1-P	Field mustard	nucleus	27.76	35.63
Bra009119.1-P	Field mustard	nucleus	24.78	33.07
Bra034165.1-P	Field mustard	nucleus	26.87	32.61
Bra007407.1-P	Field mustard	nucleus, plastid	27.16	31.06
GSMUA_Achr8P23650_001	Banana	nucleus	30.75	30.21
GSMUA_Achr9P14340_001	Banana	nucleus	32.54	30.11
Bra003346.1-P	Field mustard	nucleus	27.46	30.07
TraesCS6A01G198600.1	Wheat	nucleus, plastid	31.04	28.11
HORVU6Hr1G050140.1	Barley	nucleus, plastid	32.84	26.32
Zm00001d003549_P001	Maize	nucleus	30.15	26.23
TraesCS6B01G230000.1	Wheat	nucleus	32.54	26.2
Os04t0445600-00	Rice	nucleus	32.54	26.14
GSMUA_Achr3P05880_001	Banana	nucleus	31.34	25.99
EES12241	Sorghum	nucleus	31.34	25.74
Os02t0565000-01	Rice	nucleus	31.94	25.54
Zm00001d025514_P001	Maize	nucleus	29.85	25.51
Zm00001d016876_P001	Maize	nucleus, plastid	30.45	25.37
TraesCS6D01G184500.2	Wheat	nucleus	31.34	25.24
TraesCS2D01G311800.1	Wheat	nucleus, plastid	30.75	24.94
TraesCS2A01G313300.1	Wheat	nucleus, plastid	30.75	24.76
TraesCS2B01G332100.1	Wheat	nucleus, plastid	30.45	24.52
KXG30464	Sorghum	nucleus, plastid	29.55	23.46
Zm00001d010753_P001	Maize	nucleus	21.79	22.26
Bra001951.1-P	Field mustard	nucleus	20.6	20.35
HORVU2Hr1G077940.1	Barley	cytosol, nucleus, plastid	10.15	15.18
Zm00001d042917_P001	Maize	golgi, plasma membrane	23.88	12.05

Protein Annotations

EnsemblPlants:Bra014370.1	EnsemblPlants:Bra014370.1-P	EnsemblPlantsGene:Bra014370	ncoils:Coil	PANTHER:PTHR31307	PFAM:PF13837
SEG:seg	UniParc:UPI00025459D6	UniProt:M4DD03	MapMan:15.5.20	:	:

Description

AT1G54060 (E=6e-046) ASIL1 | ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1); sequence-specific DNA binding / transcription factor

Coordinates

chrA08:+:1364188..1365195

Molecular Weight (calculated)

36765.2 Da

IEP (calculated)

6.809

GRAVY (calculated)

-0.976

Length

335 amino acids

Sequence
(BLAST)

001: MDEEDETRSP KSPGDSLSPA PSSPPPILPT SDVTVASATK PPQSLALVVH TPSVVGGSRN GRSGGGGGGG GRDDCWSEEA TKVLIEAWGE RFSEPGKGTL
101: KQQQWKEVAE VVNESRQCKY LKTDVQCKNR IDTVKKKYKQ EKAKIASGDG PSKWLFFKKL ESLIGGAGGN NTKAPLGRRQ GNKGTVLKRG SDSMRWHFRK
201: RSASETESES DPEPEPEPEP EHSPPDSAES LPPPPPPSQL VSKRLKMDEL GGSGVGDVAK AILGFTEAYE KAETAKLKLM MELEKERMKF VKEMELQRMQ
301: FLKTQMEMTQ NDREEERSKP RINDDDVKNN GDVSS

Best Arabidopsis Sequence Match ( AT1G54060.1 )
(BLAST)

001: MEDDDEIQSI PSPGDSSLSP QAPPSPPILP TNDVTVAVVK KPQPGLSSQS PSMNALALVV HTPSVTGGGG SGNRNGRGGG GGSGGGGGGR DDCWSEEATK
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS

Arabidopsis Description

ASIL1Trihelix transcription factor ASIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.