Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30464 | Sorghum | nucleus, plastid | 90.55 | 86.26 |
| Zm00001d010753_P001 | Maize | nucleus | 58.46 | 71.65 |
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 62.94 | 68.38 |
| Os02t0565000-01 | Rice | nucleus | 69.65 | 66.83 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 67.91 | 65.62 |
| TraesCS6B01G230000.1 | Wheat | nucleus | 67.41 | 65.14 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 66.42 | 63.88 |
| Zm00001d025514_P001 | Maize | nucleus | 54.98 | 56.38 |
| Zm00001d003549_P001 | Maize | nucleus | 51.99 | 54.29 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 62.69 | 37.95 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 31.59 | 37.24 |
| CDY33246 | Canola | nucleus | 27.36 | 35.95 |
| KRH06239 | Soybean | nucleus | 32.09 | 34.86 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 31.34 | 34.81 |
| KRH47662 | Soybean | nucleus, plastid | 31.59 | 34.51 |
| CDY39101 | Canola | nucleus, plastid | 25.87 | 34.1 |
| CDY39099 | Canola | nucleus | 26.87 | 34.07 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 30.85 | 34.07 |
| CDY61477 | Canola | nucleus, plastid | 25.37 | 33.89 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 26.12 | 33.87 |
| Bra021536.1-P | Field mustard | nucleus | 25.62 | 33.66 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 24.88 | 33.22 |
| CDY02487 | Canola | nucleus, plastid | 25.12 | 32.79 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 32.84 | 32.67 |
| Zm00001d030350_P001 | Maize | nucleus | 16.67 | 31.9 |
| CDX75751 | Canola | nucleus | 28.86 | 31.18 |
| Solyc03g122030.1.1 | Tomato | nucleus | 28.11 | 31.13 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 28.61 | 30.83 |
| CDY08216 | Canola | nucleus | 25.12 | 30.79 |
| Zm00001d011571_P001 | Maize | cytosol | 23.88 | 30.48 |
| Bra014370.1-P | Field mustard | nucleus | 25.37 | 30.45 |
| Zm00001d043902_P001 | Maize | nucleus | 23.63 | 29.87 |
| Zm00001d038994_P001 | Maize | cytosol | 24.38 | 28.57 |
| CDY26148 | Canola | nucleus, plastid | 24.88 | 28.01 |
| AT3G14180.1 | Thale cress | nucleus | 30.35 | 27.54 |
| AT1G54060.1 | Thale cress | nucleus | 25.37 | 26.63 |
| CDY51405 | Canola | nucleus | 7.71 | 24.41 |
| Bra030909.1-P | Field mustard | nucleus | 7.46 | 23.44 |
| CDY33093 | Canola | cytosol, plastid | 24.63 | 22.65 |
| Zm00001d011730_P001 | Maize | nucleus, plastid | 18.66 | 21.43 |
Protein Annotations
| EMBL:BT083657 | EnsemblPlants:Zm00001d016876_P001 | EnsemblPlants:Zm00001d016876_T001 | EnsemblPlantsGene:Zm00001d016876 | EntrezGene:100384564 | ncoils:Coil |
| PANTHER:PTHR31307 | PANTHER:PTHR31307:SF12 | PFAM:PF13837 | ProteinID:AQK71869.1 | SEG:seg | UniParc:UPI0001A4BC3B |
| UniProt:C4IYL0 | MapMan:15.5.20 | : | : | : | : |
Description
Trihelix-transcription factor 24Trihelix transcription factor ASIL2
Coordinates
chr5:-:179111776..179112984
Molecular Weight (calculated)
42969.5 Da
IEP (calculated)
7.853
GRAVY (calculated)
-0.805
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDGGASRS PSPSPSRSPS PSPLPVADPV TVAAAPPGHV AVAIPLRKHS PSSGGGGGGR EDAWSDGATS TLIDAWGERF VALGRGSLRH PQWQEVAEVV
101: SSRDSYSKAP KSDVQCKNRI DTLKKKYKVE KAKHDSDWRY FDRLDDLLAP VLLKPNSSSS SAAAAAAAAA AARSAGPMVP PRINFPQRTR TPLHSSAGAK
201: WRMPSPLLQP SASSDSSDGF PPSAVANGKR QRVEEPAAAA ADNGAESSVS RAQGLRELAQ AIRRLGEVYE RVESAKRDQE LRMERERLDS ARQLEEQRVQ
301: FFLKMQMELS KATGGAATAT PTPMAVPIPT DGNGTRRAGV TAEVATSSNH RVRYRIKGSR HQHAPQQAHY QNSTSPTGGD DNGSDSDKEA QEDAEDEDEE
401: SQ
101: SSRDSYSKAP KSDVQCKNRI DTLKKKYKVE KAKHDSDWRY FDRLDDLLAP VLLKPNSSSS SAAAAAAAAA AARSAGPMVP PRINFPQRTR TPLHSSAGAK
201: WRMPSPLLQP SASSDSSDGF PPSAVANGKR QRVEEPAAAA ADNGAESSVS RAQGLRELAQ AIRRLGEVYE RVESAKRDQE LRMERERLDS ARQLEEQRVQ
301: FFLKMQMELS KATGGAATAT PTPMAVPIPT DGNGTRRAGV TAEVATSSNH RVRYRIKGSR HQHAPQQAHY QNSTSPTGGD DNGSDSDKEA QEDAEDEDEE
401: SQ
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.