Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d008871_P001 | |
| Zm00001d010783_P001 | |
| Zm00001d038803_P001 | |
| Zm00001d045617_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012742_P001 | Maize | cytosol | 84.67 | 84.67 |
| Zm00001d012741_P001 | Maize | cytosol | 43.07 | 78.67 |
| Os01t0732100-00 | Rice | mitochondrion | 43.07 | 69.41 |
| GSMUA_Achr3P15720_001 | Banana | cytosol | 35.77 | 69.01 |
| Solyc05g046390.2.1 | Tomato | plastid | 32.12 | 68.75 |
| VIT_12s0055g00700.t01 | Wine grape | cytosol | 32.85 | 63.38 |
| KRH49068 | Soybean | cytosol | 32.12 | 58.67 |
| CDY34488 | Canola | cytosol | 29.2 | 56.34 |
| AT2G31490.1 | Thale cress | cytosol | 29.2 | 56.34 |
| CDY23940 | Canola | cytosol | 29.2 | 56.34 |
| CDY19085 | Canola | cytosol | 29.2 | 56.34 |
| CDY15390 | Canola | cytosol | 29.2 | 56.34 |
| CDY10808 | Canola | cytosol | 29.2 | 56.34 |
| CDY10807 | Canola | cytosol | 29.2 | 56.34 |
| CDX84783 | Canola | cytosol | 29.2 | 56.34 |
| Bra018237.1-P | Field mustard | cytosol | 29.2 | 56.34 |
| Bra022843.1-P | Field mustard | cytosol | 27.74 | 55.88 |
| Solyc09g059220.1.1 | Tomato | cytosol | 24.82 | 45.95 |
| OQU91338 | Sorghum | plastid | 31.39 | 34.96 |
Protein Annotations
| EnsemblPlants:Zm00001d012469_P001 | EnsemblPlants:Zm00001d012469_T001 | EnsemblPlantsGene:Zm00001d012469 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR35479 | PANTHER:PTHR35479:SF3 | ProteinID:AQK99607.1 | TMHMM:TMhelix | UniParc:UPI000843C3AB | UniProt:A0A1D6G8Z2 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:175073817..175074230
Molecular Weight (calculated)
15354.7 Da
IEP (calculated)
8.772
GRAVY (calculated)
0.040
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGMEVHKN RWIEEWNAGR ENLEFNFRWT RRSLAVVGLF GLAVPILVYK GIVREFVIHY SEPLLSFHCP FPLSPNPKIN FLFVPAGLDP AYAGRGCRPA
101: IQEVPVSGVQ GCRRRRSLDR GCEEGSFHSV CVGIVLV
101: IQEVPVSGVQ GCRRRRSLDR GCEEGSFHSV CVGIVLV
1: MGGGMETNKN KFIEDWGSAR ENLEHNFRWT RRNFALIGIF GIALPIIVYK GIVKDFHMQD EDAGRPHRKF L
Arabidopsis Description
AT2G31490 protein [Source:UniProtKB/TrEMBL;Acc:Q9SIQ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.