Factsheet for Zm00001d045617_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plasma membrane, nucleus

Predictor Summary:

nucleus 1
mitochondrion 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane, vacuole
Any Predictor:	mitochondrion, nucleus, plasma membrane
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001811_P001
Zm00001d002148_P002
Zm00001d004543_P001
Zm00001d007067_P003
Zm00001d007394_P001
Zm00001d007729_P001
Zm00001d009578_P001
Zm00001d011536_P001
Zm00001d018662_P001
Zm00001d019459_P002
Zm00001d023774_P002
Zm00001d024933_P003
Zm00001d025020_P001
Zm00001d026634_P002
Zm00001d027680_P003
Zm00001d029226_P001
Zm00001d031200_P002
Zm00001d032483_P001
Zm00001d032568_P001
Zm00001d034431_P001
Zm00001d037522_P001
Zm00001d039619_P003
Zm00001d040435_P003
Zm00001d040481_P001
Zm00001d040493_P001
Zm00001d040501_P001
Zm00001d047446_P002
Zm00001d048402_P001
Zm00001d050146_P001
Zm00001d052964_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01010.1	Zm00001d007729_P001	AT1G10030.1	21798944
AT1G01010.1	Zm00001d023774_P002	AT1G10030.1	21798944
AT1G01010.1	Zm00001d031200_P002	AT1G10030.1	21798944
AT1G01010.1	Zm00001d037522_P001	AT1G10030.1	21798944
AT1G01010.1	Zm00001d040481_P001	AT1G10030.1	21798944
AT1G01010.1	Zm00001d040493_P001	AT1G10030.1	21798944
AT1G01010.1	Zm00001d040501_P001	AT1G10030.1	21798944
AT1G01010.1	Zm00001d002148_P002	AT1G16240.1	21798944
AT1G01010.1	Zm00001d050146_P001	AT1G16240.1	21798944
AT1G01010.1	Zm00001d009578_P001	AT1G17080.1	21798944
AT1G01010.1	Zm00001d011536_P001	AT1G17080.1	21798944
AT1G01010.1	Zm00001d039619_P003	AT1G17080.1	21798944
AT1G01010.1	Zm00001d040435_P003	AT1G77350.1	21798944
AT1G01010.1	Zm00001d001811_P001	AT2G20740.1	21798944
AT1G01010.1	Zm00001d026634_P002	AT2G20740.1	21798944
AT1G01010.1	Zm00001d019459_P002	AT2G32380.1	21798944
AT1G01010.1	Zm00001d004543_P001	AT3G07950.1	21798944
AT1G01010.1	Zm00001d007067_P003	AT3G07950.1	21798944
AT1G01010.1	Zm00001d024933_P003	AT3G07950.1	21798944
AT1G01010.1	Zm00001d029226_P001	AT3G07950.1	21798944
AT1G01010.1	Zm00001d047446_P002	AT3G07950.1	21798944
AT1G01010.1	Zm00001d034431_P001	AT4G14730.1	21798944
AT1G01010.1	Zm00001d052964_P002	AT4G14730.1	21798944
AT1G01010.1	Zm00001d018662_P001	AT5G43460.1	21798944
AT1G01010.1	Zm00001d025020_P001	AT5G43460.1	21798944
AT1G01010.1	Zm00001d027680_P003	AT5G43460.1	21798944
AT1G01010.1	Zm00001d032483_P001	AT5G43460.1	21798944
AT1G01010.1	Zm00001d032568_P001	AT5G43460.1	21798944
AT1G01010.1	Zm00001d048402_P001	AT5G43460.1	21798944
AT1G01010.1	Zm00001d007394_P001	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87676	Sorghum	plastid	63.5	60.16
Os06t0101800-01	Rice	nucleus	24.06	40.95
HORVU7Hr1G000910.1	Barley	nucleus	30.61	35.28
TraesCS7D01G000200.1	Wheat	plastid	31.1	33.87
TraesCS7A01G000300.1	Wheat	nucleus	28.81	33.33
TraesCS4A01G499900.1	Wheat	plastid	30.77	32.64
KRH06324	Soybean	cytosol	14.08	32.21
AT1G02210.1	Thale cress	cytosol, nucleus, plastid	4.58	32.18
CDY32449	Canola	nucleus	11.13	30.36
CDY32450	Canola	nucleus	11.13	30.36
Bra010895.1-P	Field mustard	nucleus	6.06	30.08
CDX90132	Canola	nucleus	6.06	30.08
Bra032615.1-P	Field mustard	nucleus	10.97	29.91
CDY15223	Canola	nucleus	9.98	28.77
CDY11741	Canola	nucleus	6.38	28.06
CDY55325	Canola	nucleus	11.13	26.77
CDY15220	Canola	nucleus	8.84	26.73
KRH47750	Soybean	cytosol	13.42	26.62
CDY55326	Canola	nucleus	10.47	26.45
CDX89994	Canola	nucleus	10.47	25.5
AT4G01520.1	Thale cress	nucleus	12.6	25.5
CDY15210	Canola	cytosol, nucleus, plastid	10.8	25.48
CDY07138	Canola	nucleus	11.95	25.35
AT3G04430.1	Thale cress	nucleus	8.18	25.25
Bra033299.1-P	Field mustard	nucleus	10.31	25.1
CDY59815	Canola	cytosol	10.97	25.09
Bra036328.1-P	Field mustard	nucleus	11.78	25.0
Bra027596.1-P	Field mustard	nucleus	9.33	23.55
Bra033302.1-P	Field mustard	nucleus	9.98	23.46
KRH06326	Soybean	nucleus	16.04	22.74
Bra033297.1-P	Field mustard	nucleus	8.35	22.67
CDX89996	Canola	nucleus	9.49	22.48
KRH47748	Soybean	cytosol	14.57	21.98
KRH06327	Soybean	cytosol	14.24	21.75
CDX89991	Canola	nucleus	9.49	21.56
CDX89995	Canola	nucleus	12.44	21.41
AT1G02230.1	Thale cress	nucleus	12.44	21.17
Bra036326.1-P	Field mustard	nucleus	12.77	21.08
CDY07135	Canola	nucleus	12.77	21.02
AT1G02250.1	Thale cress	nucleus	12.28	20.72
CDY15214	Canola	nucleus	9.98	20.61
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	9.49	20.57
Bra033298.1-P	Field mustard	nucleus	12.44	20.32
Bra033306.1-P	Field mustard	nucleus	12.77	20.31
AT3G04420.1	Thale cress	nucleus	11.29	20.18
CDY07136	Canola	cytosol	13.91	19.95
Bra036327.1-P	Field mustard	cytosol	13.58	19.53
CDY59814	Canola	cytosol	13.58	19.53
CDY15217	Canola	nucleus	11.13	19.48
KRH47747	Soybean	nucleus	15.55	19.11
AT1G01010.1	Thale cress	nucleus	13.42	19.11
CDX97252	Canola	cytosol	13.26	18.97
AT4G01540.1	Thale cress	cytosol	14.57	18.82
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	13.26	18.28
AT1G02220.1	Thale cress	nucleus	11.62	18.02
CDY59812	Canola	cytosol	13.09	17.74
CDY15224	Canola	cytosol	10.8	17.65
AT4G01550.1	Thale cress	cytosol, golgi, nucleus	13.09	17.51
Bra033303.1-P	Field mustard	nucleus	10.97	17.45
Bra033300.1-P	Field mustard	nucleus	13.09	17.43
CDY01928	Canola	cytosol, nucleus, vacuole	13.75	17.28
CDY15212	Canola	nucleus	11.78	16.94
CDX89993	Canola	nucleus	12.77	16.7
CDX89990	Canola	nucleus	10.8	16.67
Bra033308.1-P	Field mustard	nucleus	10.8	16.67
CDY15221	Canola	cytosol, nucleus, peroxisome	11.46	16.47
CDY15218	Canola	nucleus	9.82	16.44
CDY15215	Canola	nucleus	10.47	15.06
Bra033296.1-P	Field mustard	nucleus	11.13	14.32
CDX89999	Canola	nucleus	10.8	13.89
CDY15225	Canola	nucleus	9.0	13.78

Protein Annotations

EntrezGene:100383571	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:AQL02827.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093	UniProt:K7VTB2
EMBL:KJ726982	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF54	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0002212AE3	EnsemblPlantsGene:Zm00001d045617	EnsemblPlants:Zm00001d045617_P001
EnsemblPlants:Zm00001d045617_T001	SEG:seg	:	:	:	:

Description

NAC-transcription factor 117Protein NTM1-like 9

Coordinates

chr9:+:28909570..28912421

Molecular Weight (calculated)

66681.2 Da

IEP (calculated)

5.832

GRAVY (calculated)

-0.403

Length

611 amino acids

Sequence
(BLAST)

001: MQPPPQLPAA LPVGFRFRPT DEELVLHYLK PKIAGRAHAD LLLIPDVDLS ACEPWELPAK ALIRSDDPEW FFFAPLDRKY PGGHRSNRST AAGYWKATGK
101: DRLIRSRPAG TLIGVKKTLV FHRGRAPRGH RTAWIMHEYR TAEPQLPQGQ NGSFVLYRLF NKNEEESEAS DAADSPSTSS PPIAPEVKTE NLSQPTSAKM
201: SPHIATVSSN EPTSNQGDVN LLDVLTQLPD LHPEQAFDGF PTITSPMRPY TDHPFFGNAG DQDLSAYIDS IISHQDLEGL LASPSLADMV EQATVNVEPH
301: PINVPVLDNS SNSNRLAENS RGKVGSETLL LIKGTDGTGA AACSSSATKI LQDNTDDHTG AQSNLASSAS AQVSHFYNQY ELQSAFVPEM EPPNSGTLCS
401: AASPTPHPQH LFNGVVASDV FNGIQGWPAE PLTDPHQGNA PRRIRLAHSI QRASVTEPVL TSDVEDEDEP GICYSADSSS ASNTEDYANV FSQTMAGETM
501: RIQRGGVIST QVVSSTEKLQ DFTFDEGTLL HGELHHGGNL RQRRTEETRQ DVRDGMQHSV HVTRVAVPSL RRKGEAAQIG SVVRLLLLVL LLVVIFVFVG
601: LWKCSSFRLL H

Best Arabidopsis Sequence Match ( AT4G35580.3 )
(BLAST)

001: MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEFVVVTGT GAEQKETRRE AMEGGCNGNG
501: GCDGWGRDGY MEDTGEFMTH ETQRERERES NVV

Arabidopsis Description

NTL9NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.