Factsheet for Zm00001d048402_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001820_P001
Zm00001d013937_P001
Zm00001d017390_P001
Zm00001d017768_P006
Zm00001d020667_P001
Zm00001d025939_P003
Zm00001d032576_P001
Zm00001d036342_P001
Zm00001d038964_P001
Zm00001d049553_P001
Zm00001d051288_P001
Zm00001d051562_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04340.1	Zm00001d001820_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d013937_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d032576_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d017768_P006	AT3G50910.1	21798944
AT1G04340.1	Zm00001d020667_P001	AT3G50910.1	21798944
AT1G04340.1	Zm00001d038964_P001	AT3G50910.1	21798944
AT1G04340.1	Zm00001d051562_P001	AT3G50910.1	21798944
AT5G43460.1	Zm00001d017390_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d025939_P003	AT3G60600.1	21798944
AT5G43460.1	Zm00001d036342_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d049553_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d051288_P001	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92848	Sorghum	extracellular	92.36	92.36
Zm00001d027680_P003	Maize	endoplasmic reticulum, extracellular, plasma membrane	92.99	89.02
Zm00001d032568_P001	Maize	endoplasmic reticulum, extracellular, vacuole	57.96	84.26
Zm00001d018662_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	85.35	83.75
Os03t0149200-01	Rice	extracellular	80.89	80.89
Zm00001d032483_P001	Maize	endoplasmic reticulum, extracellular, vacuole	62.42	79.03
TraesCS4D01G312900.1	Wheat	extracellular	77.71	77.71
TraesCS4B01G316300.1	Wheat	extracellular	77.71	77.71
HORVU4Hr1G080140.1	Barley	extracellular	77.07	77.07
TraesCS4A01G415500.1	Wheat	extracellular	76.43	76.43
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	73.25	73.25
GSMUA_Achr4P26720_001	Banana	extracellular	71.97	72.44
GSMUA_Achr1P01370_001	Banana	extracellular	71.97	72.44
GSMUA_Achr8P14320_001	Banana	plasma membrane	68.79	68.35
KRH32166	Soybean	endoplasmic reticulum	62.42	62.82
Bra041032.1-P	Field mustard	extracellular	61.78	62.18
CDY49421	Canola	extracellular	61.15	61.54
CDY12771	Canola	extracellular	61.15	61.54
KRH67349	Soybean	plasma membrane	61.15	61.15
KRH19536	Soybean	endoplasmic reticulum	60.51	60.9
CDY47153	Canola	endoplasmic reticulum	61.15	60.76
CDY12466	Canola	endoplasmic reticulum	61.15	60.76
Solyc09g089670.2.1	Tomato	extracellular, plasma membrane, vacuole	61.78	60.25
Solyc03g005470.2.1	Tomato	plastid	59.87	59.49
Bra039861.1-P	Field mustard	plasma membrane	59.87	59.49
KRG95647	Soybean	plasma membrane	59.24	59.24
AT4G14420.1	Thale cress	plasma membrane	58.6	58.23
VIT_05s0049g00200.t01	Wine grape	extracellular	57.96	57.96
KRG92302	Soybean	extracellular	54.78	54.78
KRH34500	Soybean	extracellular	53.5	53.5
CDY59304	Canola	plasma membrane	52.87	52.87
Bra015305.1-P	Field mustard	extracellular, plasma membrane, vacuole	54.14	52.47
CDY18220	Canola	extracellular, plasma membrane, vacuole	54.14	52.47
KRG90387	Soybean	extracellular	52.23	52.23
CDY60669	Canola	extracellular, plasma membrane, vacuole	53.5	51.85
KRH31721	Soybean	endoplasmic reticulum	51.59	51.59
CDY32939	Canola	plasma membrane	51.59	51.59
Bra027498.1-P	Field mustard	plasma membrane	51.59	51.59
AT1G04340.1	Thale cress	plasma membrane	52.23	51.57
CDY15499	Canola	plasma membrane	54.14	51.52
Bra030565.1-P	Field mustard	plasma membrane	54.14	51.52
AT5G43460.1	Thale cress	extracellular	50.32	51.3
CDX86640	Canola	extracellular, plasma membrane, vacuole	52.87	50.61
Solyc06g053660.2.1	Tomato	plasma membrane	47.13	47.13
PGSC0003DMT400044245	Potato	cytosol	52.23	46.33
PGSC0003DMT400034860	Potato	plastid	54.14	46.2
VIT_05s0049g00210.t01	Wine grape	plastid	64.97	44.35
Zm00001d025020_P001	Maize	extracellular, golgi, plasma membrane	67.52	43.8
KRH73866	Soybean	plastid	38.22	40.27
CDY10063	Canola	plasma membrane	42.04	36.46
PGSC0003DMT400042097	Potato	cytosol	41.4	33.33

Protein Annotations

EnsemblPlants:Zm00001d048402_P001	EnsemblPlants:Zm00001d048402_T001	EnsemblPlantsGene:Zm00001d048402	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:HR_lesion	PANTHER:PTHR31474	PANTHER:PTHR31474:SF1	PFAM:PF05514	ProteinID:AQL09574.1	ProteinID:AQL09575.1
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001D840BC	UniProt:K7VQA2	MapMan:35.2

Description

HR-like lesion-inducing protein-related

Coordinates

chr9:-:155629914..155633305

Molecular Weight (calculated)

17129.2 Da

IEP (calculated)

10.250

GRAVY (calculated)

0.469

Length

157 amino acids

Sequence
(BLAST)

001: MGFVSFVGRV LFVAAFLLSA YQEFNEFGAD GGPAAKALQP KFNVFVKNIS AHLGVAVPHI ELKHVIAATI ALKGLGSLLF ILSSSLGAYL LLLYLALITP
101: IVHDFYNYDT EKEEFARLFA KFTQDVALVG ALLVFLGMKN SIPKRQGKKK AHKAKTN

Best Arabidopsis Sequence Match ( AT4G14420.1 )
(BLAST)

001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN

Arabidopsis Description

AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.