Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 8
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH19536 Soybean endoplasmic reticulum 95.51 95.51
KRH67349 Soybean plasma membrane 86.54 85.99
KRG95647 Soybean plasma membrane 85.9 85.35
GSMUA_Achr1P01370_001 Banana extracellular 66.67 66.67
CDY12466 Canola endoplasmic reticulum 67.31 66.46
CDY47153 Canola endoplasmic reticulum 67.31 66.46
Os03t0149200-01 Rice extracellular 66.67 66.24
Bra041032.1-P Field mustard extracellular 66.03 66.03
GSMUA_Achr2P04100_001 Banana extracellular 66.67 65.82
GSMUA_Achr4P26720_001 Banana extracellular 65.38 65.38
CDY49421 Canola extracellular 65.38 65.38
CDY12771 Canola extracellular 65.38 65.38
AT4G14420.1 Thale cress plasma membrane 66.03 65.19
Bra039861.1-P Field mustard plasma membrane 66.03 65.19
GSMUA_Achr11P... Banana endoplasmic reticulum, extracellular, plasma membrane 65.38 64.97
HORVU4Hr1G080140.1 Barley extracellular 65.38 64.97
TraesCS4D01G312900.1 Wheat extracellular 65.38 64.97
TraesCS4B01G316300.1 Wheat extracellular 64.74 64.33
TraesCS4A01G415500.1 Wheat extracellular 64.74 64.33
Os04t0181100-01 Rice plasma membrane 64.74 64.33
Solyc09g089670.2.1 Tomato extracellular, plasma membrane, vacuole 66.03 63.98
EER92848 Sorghum extracellular 63.46 63.06
Zm00001d048402_P001 Maize extracellular, golgi, plasma membrane 62.82 62.42
OQU81217 Sorghum extracellular 62.82 62.42
Solyc03g005470.2.1 Tomato plastid 62.82 62.03
Zm00001d027680_P003 Maize endoplasmic reticulum, extracellular, plasma membrane 64.74 61.59
GSMUA_Achr8P14320_001 Banana plasma membrane 62.18 61.39
Os10t0445500-01 Rice plasma membrane 62.18 61.39
TraesCS2B01G040200.1 Wheat extracellular 61.54 61.15
TraesCS2A01G026900.1 Wheat extracellular 60.9 60.51
TraesCS2D01G029000.1 Wheat extracellular 60.26 59.87
Zm00001d032568_P001 Maize endoplasmic reticulum, extracellular, vacuole 39.74 57.41
KRH31721 Soybean endoplasmic reticulum 57.69 57.32
KRG90387 Soybean extracellular 57.69 57.32
Zm00001d018662_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 57.05 55.62
KRG92302 Soybean extracellular 55.77 55.41
KRH34500 Soybean extracellular 55.13 54.78
Zm00001d032483_P001 Maize endoplasmic reticulum, extracellular, vacuole 41.67 52.42
PGSC0003DMT400044245 Potato cytosol 56.41 49.72
VIT_05s0049g00210.t01 Wine grape plastid 73.08 49.57
PGSC0003DMT400034860 Potato plastid 56.41 47.83
Zm00001d025020_P001 Maize extracellular, golgi, plasma membrane 59.62 38.43
KRH73866 Soybean plastid 35.9 37.58
Protein Annotations
EMBL:ACUP02006098EnsemblPlants:KRH32166EnsemblPlantsGene:GLYMA_10G035300GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:HR_lesionPANTHER:PTHR31474PANTHER:PTHR31474:SF9PFAM:PF05514ProteinID:KRH32166ProteinID:KRH32166.1
SEG:segSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00023C90ABUniProt:I1L8C5MapMan:35.2
Description
hypothetical protein
Coordinates
chr10:+:3081944..3084883
Molecular Weight (calculated)
17423.4 Da
IEP (calculated)
10.050
GRAVY (calculated)
0.357
Length
156 amino acids
Sequence
(BLAST)
001: MAFASFLGRV LFASVFILSA YQEFNEFGVD GGPAAKALRP KFDAFTHRVH SQVGFQLPEI DLKFLIAGAI ALKGLGGVLF IFGSSFGALL LLLHQLIATP
101: IHYDFYNYDS EDKEFTQLFI KFTQNMALFG ALLFFIGMKN SIPRRVPKKA PKTKTY
Best Arabidopsis Sequence Match ( AT4G14420.1 )
(BLAST)
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.