Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 82.8 | 82.28 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 80.89 | 81.41 |
| Os03t0149200-01 | Rice | extracellular | 78.98 | 78.98 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 78.34 | 78.85 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 75.8 | 75.8 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 75.16 | 75.16 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 75.16 | 75.16 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 75.16 | 75.16 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 73.25 | 73.25 |
| EER92848 | Sorghum | extracellular | 73.25 | 73.25 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 75.8 | 72.56 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 49.68 | 72.22 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 71.34 | 70.89 |
| Os04t0181100-01 | Rice | plasma membrane | 70.7 | 70.7 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 68.79 | 68.79 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 68.15 | 68.15 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 68.15 | 68.15 |
| OQU81217 | Sorghum | extracellular | 67.52 | 67.52 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 68.79 | 67.5 |
| Os10t0445500-01 | Rice | plasma membrane | 67.52 | 67.09 |
| KRH67349 | Soybean | plasma membrane | 66.88 | 66.88 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 52.23 | 66.13 |
| KRG95647 | Soybean | plasma membrane | 65.61 | 65.61 |
| KRH32166 | Soybean | endoplasmic reticulum | 64.97 | 65.38 |
| VIT_05s0049g00200.t01 | Wine grape | extracellular | 63.69 | 63.69 |
| KRH19536 | Soybean | endoplasmic reticulum | 61.78 | 62.18 |
| Solyc09g089670.2.1 | Tomato | extracellular, plasma membrane, vacuole | 63.69 | 62.11 |
| CDY47153 | Canola | endoplasmic reticulum | 61.78 | 61.39 |
| CDY12466 | Canola | endoplasmic reticulum | 61.78 | 61.39 |
| Bra041032.1-P | Field mustard | extracellular | 59.87 | 60.26 |
| Solyc03g005470.2.1 | Tomato | plastid | 60.51 | 60.13 |
| Bra039861.1-P | Field mustard | plasma membrane | 60.51 | 60.13 |
| CDY49421 | Canola | extracellular | 59.24 | 59.62 |
| CDY12771 | Canola | extracellular | 58.6 | 58.97 |
| AT4G14420.1 | Thale cress | plasma membrane | 59.24 | 58.86 |
| KRG92302 | Soybean | extracellular | 56.05 | 56.05 |
| KRG90387 | Soybean | extracellular | 55.41 | 55.41 |
| KRH31721 | Soybean | endoplasmic reticulum | 54.78 | 54.78 |
| KRH34500 | Soybean | extracellular | 54.14 | 54.14 |
| CDY59304 | Canola | plasma membrane | 54.14 | 54.14 |
| CDY32939 | Canola | plasma membrane | 52.87 | 52.87 |
| Bra027498.1-P | Field mustard | plasma membrane | 52.87 | 52.87 |
| AT5G43460.1 | Thale cress | extracellular | 50.96 | 51.95 |
| AT1G04340.1 | Thale cress | plasma membrane | 51.59 | 50.94 |
| CDY15499 | Canola | plasma membrane | 53.5 | 50.91 |
| Bra030565.1-P | Field mustard | plasma membrane | 53.5 | 50.91 |
| CDY18220 | Canola | extracellular, plasma membrane, vacuole | 52.23 | 50.62 |
| Bra015305.1-P | Field mustard | extracellular, plasma membrane, vacuole | 52.23 | 50.62 |
| Solyc06g053660.2.1 | Tomato | plasma membrane | 50.32 | 50.32 |
| CDY60669 | Canola | extracellular, plasma membrane, vacuole | 51.59 | 50.0 |
| CDX86640 | Canola | extracellular, plasma membrane, vacuole | 52.23 | 50.0 |
| PGSC0003DMT400044245 | Potato | cytosol | 54.78 | 48.59 |
| PGSC0003DMT400034860 | Potato | plastid | 54.78 | 46.74 |
| VIT_05s0049g00210.t01 | Wine grape | plastid | 67.52 | 46.09 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 65.61 | 42.56 |
| KRH73866 | Soybean | plastid | 39.49 | 41.61 |
| CDY10063 | Canola | plasma membrane | 40.76 | 35.36 |
| PGSC0003DMT400042097 | Potato | cytosol | 43.31 | 34.87 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P22010_001 | EnsemblPlants:GSMUA_Achr11T22010_001 | EnsemblPlantsGene:GSMUA_Achr11G22010_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HR_lesion | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF5 | PFAM:PF05514 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000296C3FF | UniProt:M0RUD1 | MapMan:35.2 | : | : |
Description
nicotiana lesion-inducing like, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G22010_001]
Coordinates
chr11:-:22427952..22433410
Molecular Weight (calculated)
17628.7 Da
IEP (calculated)
10.102
GRAVY (calculated)
0.390
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFVSFAGRV LFASVFLLSA YQEFNEFGVD GGPAAEALRP KYNVFMKHVS SHLGIVVPHI EMKHVVASTI YLKGFGSILF IFSSSFGAYL LLLYLALITP
101: VMYDFYNYDV EKPEFAQLFS KFAQNLALFG ALLFFLGIKN SILRRQPKKK SSKSKTN
101: VMYDFYNYDV EKPEFAQLFS KFAQNLALFG ALLFFLGIKN SILRRQPKKK SSKSKTN
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.