CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015305.1-P	Field mustard	extracellular, plasma membrane, vacuole	99.38	99.38
CDY18220	Canola	extracellular, plasma membrane, vacuole	97.53	97.53
CDY15499	Canola	plasma membrane	90.12	88.48
CDX86640	Canola	extracellular, plasma membrane, vacuole	88.89	87.8
CDY32939	Canola	plasma membrane	84.57	87.26
CDY59304	Canola	plasma membrane	82.72	85.35
CDY10063	Canola	plasma membrane	70.99	63.54
VIT_05s0049g00200.t01	Wine grape	extracellular	59.88	61.78
KRH31721	Soybean	endoplasmic reticulum	58.64	60.51
KRG92302	Soybean	extracellular	58.64	60.51
KRG90387	Soybean	extracellular	58.64	60.51
KRH34500	Soybean	extracellular	58.02	59.87
Solyc06g053660.2.1	Tomato	plasma membrane	55.56	57.32
TraesCS4A01G415500.1	Wheat	extracellular	54.94	56.69
CDY49421	Canola	extracellular	53.7	55.77
Os03t0149200-01	Rice	extracellular	53.7	55.41
CDY12466	Canola	endoplasmic reticulum	53.7	55.06
CDY47153	Canola	endoplasmic reticulum	53.7	55.06
TraesCS4D01G312900.1	Wheat	extracellular	53.09	54.78
HORVU4Hr1G080140.1	Barley	extracellular	53.09	54.78
TraesCS4B01G316300.1	Wheat	extracellular	53.09	54.78
CDY12771	Canola	extracellular	52.47	54.49
Os04t0181100-01	Rice	plasma membrane	52.47	54.14
Zm00001d032568_P001	Maize	endoplasmic reticulum, extracellular, vacuole	35.8	53.7
Zm00001d048402_P001	Maize	extracellular, golgi, plasma membrane	51.85	53.5
EER92848	Sorghum	extracellular	51.85	53.5
OQU81217	Sorghum	extracellular	51.85	53.5
GSMUA_Achr1P01370_001	Banana	extracellular	51.23	53.21
GSMUA_Achr4P26720_001	Banana	extracellular	51.23	53.21
GSMUA_Achr2P04100_001	Banana	extracellular	51.85	53.16
TraesCS2D01G029000.1	Wheat	extracellular	50.62	52.23
Os10t0445500-01	Rice	plasma membrane	50.62	51.9
TraesCS2A01G026900.1	Wheat	extracellular	50.0	51.59
TraesCS2B01G040200.1	Wheat	extracellular	50.0	51.59
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	50.0	51.59
Zm00001d027680_P003	Maize	endoplasmic reticulum, extracellular, plasma membrane	51.85	51.22
GSMUA_Achr8P14320_001	Banana	plasma membrane	48.77	50.0
Zm00001d032483_P001	Maize	endoplasmic reticulum, extracellular, vacuole	37.04	48.39
Zm00001d018662_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	46.91	47.5
KRH73866	Soybean	plastid	36.42	39.6
PGSC0003DMT400042097	Potato	cytosol	45.68	37.95
Zm00001d025020_P001	Maize	extracellular, golgi, plasma membrane	51.23	34.3

Protein Annotations

EnsemblPlants:CDY60669	EnsemblPlantsGene:GSBRNA2T00029906001	GO:A0A078JA21	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:HR_lesion	PANTHER:PTHR31474	PANTHER:PTHR31474:SF4	PFAM:PF05514	ProteinID:CDY60669	ProteinID:CDY60669.1
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE5803	UniProt:A0A078JA21	MapMan:35.2

Description

BnaA10g27800DBnaA10g27800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JA21]

Coordinates

chrLK033903:+:37985..39442

Molecular Weight (calculated)

17506.7 Da

IEP (calculated)

10.337

GRAVY (calculated)

0.540

Length

162 amino acids

Sequence
(BLAST)

001: MGFFSFLGRV LFASLFILSA WQMFTDFGAD GGPAAKELAP KLGLAKSHLS SRLGVALPDI EVKQVVSAIV ALKGLGGLLF VVGNIFGAYL LAFYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN SRTTSSSKSS NLKKRTPKPK AA

Best Arabidopsis Sequence Match ( AT1G04340.1 )
(BLAST)

001: MGFFSFLGRV LFASLFILSA WQMFNDFGTD GGPAAKELAP KLDLTKAHLS SILGVSLPNL EVKQVVWAIV ALKGLGGLLF VIGNIFGAYL LAVYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA

Arabidopsis Description

At1g04340/F19P19_23 [Source:UniProtKB/TrEMBL;Acc:O22690]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.