Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12466 | Canola | endoplasmic reticulum | 100.0 | 100.0 |
| Bra039861.1-P | Field mustard | plasma membrane | 98.73 | 98.73 |
| AT4G14420.1 | Thale cress | plasma membrane | 93.67 | 93.67 |
| CDY12771 | Canola | extracellular | 91.14 | 92.31 |
| CDY49421 | Canola | extracellular | 91.14 | 92.31 |
| Solyc09g089670.2.1 | Tomato | extracellular, plasma membrane, vacuole | 70.25 | 68.94 |
| KRH32166 | Soybean | endoplasmic reticulum | 66.46 | 67.31 |
| Solyc03g005470.2.1 | Tomato | plastid | 67.09 | 67.09 |
| KRG95647 | Soybean | plasma membrane | 65.82 | 66.24 |
| KRH67349 | Soybean | plasma membrane | 64.56 | 64.97 |
| KRH19536 | Soybean | endoplasmic reticulum | 62.66 | 63.46 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 62.66 | 62.66 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 61.39 | 61.78 |
| Os03t0149200-01 | Rice | extracellular | 61.39 | 61.78 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 60.76 | 61.54 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 60.76 | 61.15 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 63.29 | 60.98 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 60.13 | 60.51 |
| EER92848 | Sorghum | extracellular | 60.13 | 60.51 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 59.49 | 60.26 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 60.13 | 60.13 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 59.49 | 59.87 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 40.51 | 59.26 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 58.86 | 59.24 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 58.86 | 59.24 |
| Os10t0445500-01 | Rice | plasma membrane | 58.23 | 58.23 |
| OQU81217 | Sorghum | extracellular | 57.59 | 57.96 |
| Os04t0181100-01 | Rice | plasma membrane | 56.33 | 56.69 |
| CDY59304 | Canola | plasma membrane | 56.33 | 56.69 |
| CDY32939 | Canola | plasma membrane | 55.06 | 55.41 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 54.43 | 54.78 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 53.8 | 54.14 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 54.43 | 53.75 |
| CDY60669 | Canola | extracellular, plasma membrane, vacuole | 55.06 | 53.7 |
| CDY18220 | Canola | extracellular, plasma membrane, vacuole | 55.06 | 53.7 |
| PGSC0003DMT400044245 | Potato | cytosol | 60.13 | 53.67 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 53.16 | 53.5 |
| CDY15499 | Canola | plasma membrane | 55.7 | 53.33 |
| CDX86640 | Canola | extracellular, plasma membrane, vacuole | 54.43 | 52.44 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 40.51 | 51.61 |
| PGSC0003DMT400034860 | Potato | plastid | 58.23 | 50.0 |
| VIT_05s0049g00210.t01 | Wine grape | plastid | 69.62 | 47.83 |
| CDY10063 | Canola | plasma membrane | 41.77 | 36.46 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 55.06 | 35.95 |
Protein Annotations
| EnsemblPlants:CDY47153 | EnsemblPlantsGene:GSBRNA2T00086822001 | GO:A0A078ID74 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HR_lesion | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF1 | PFAM:PF05514 | ProteinID:CDY12466.1 | ProteinID:CDY47153 |
| ProteinID:CDY47153.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001D83ECB | UniProt:A0A078ID74 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA08g05300DBnaA08g05300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID74]
Coordinates
chrLK032699:+:115294..116940
Molecular Weight (calculated)
17371.3 Da
IEP (calculated)
10.745
GRAVY (calculated)
0.224
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MELASFVGRA LFVSVFLLSA WQEFNGFGDD GGRAAKSLRP KFNAFVSHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DKKEFSQLFS KFTQSLALLG ALLFFIGMKN SRRHGRQLRK KAPKAKAN
101: ILYDFYNYDV DKKEFSQLFS KFTQSLALLG ALLFFIGMKN SRRHGRQLRK KAPKAKAN
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.