Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22908117
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g089670.2.1 | Tomato | extracellular, plasma membrane, vacuole | 76.58 | 75.16 |
| PGSC0003DMT400034860 | Potato | plastid | 84.81 | 72.83 |
| CDY12466 | Canola | endoplasmic reticulum | 67.09 | 67.09 |
| CDY47153 | Canola | endoplasmic reticulum | 67.09 | 67.09 |
| AT4G14420.1 | Thale cress | plasma membrane | 67.09 | 67.09 |
| Bra039861.1-P | Field mustard | plasma membrane | 65.82 | 65.82 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 63.29 | 64.1 |
| Bra041032.1-P | Field mustard | extracellular | 62.03 | 62.82 |
| KRH32166 | Soybean | endoplasmic reticulum | 62.03 | 62.82 |
| CDY49421 | Canola | extracellular | 61.39 | 62.18 |
| CDY12771 | Canola | extracellular | 60.76 | 61.54 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 60.76 | 61.54 |
| KRG95647 | Soybean | plasma membrane | 60.76 | 61.15 |
| KRH19536 | Soybean | endoplasmic reticulum | 60.13 | 60.9 |
| Os03t0149200-01 | Rice | extracellular | 60.13 | 60.51 |
| KRH67349 | Soybean | plasma membrane | 60.13 | 60.51 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 60.13 | 60.51 |
| EER92848 | Sorghum | extracellular | 60.13 | 60.51 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 59.49 | 59.87 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 62.03 | 59.76 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 58.86 | 59.24 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 58.23 | 58.6 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 58.23 | 58.6 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 58.23 | 58.6 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 58.23 | 58.23 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 55.7 | 55.7 |
| Os10t0445500-01 | Rice | plasma membrane | 55.7 | 55.7 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 37.97 | 55.56 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 55.7 | 55.0 |
| OQU81217 | Sorghum | extracellular | 54.43 | 54.78 |
| Os04t0181100-01 | Rice | plasma membrane | 53.16 | 53.5 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 52.53 | 52.87 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 51.9 | 52.23 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 51.27 | 51.59 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.87 | 50.81 |
| Solyc06g053660.2.1 | Tomato | plasma membrane | 46.84 | 47.13 |
| VIT_05s0049g00210.t01 | Wine grape | plastid | 63.92 | 43.91 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 52.53 | 34.3 |
Protein Annotations
| EnsemblPlants:Solyc03g005470.2.1 | EnsemblPlantsGene:Solyc03g005470.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:HR_lesion |
| PANTHER:PTHR31474 | PANTHER:PTHR31474:SF1 | PFAM:PF05514 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0002769086 | UniProt:K4BDX1 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3:+:366040..369863
Molecular Weight (calculated)
17339.6 Da
IEP (calculated)
10.479
GRAVY (calculated)
0.399
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLSFLGRL LFVSVFVLSA YQEFNDFGVD GGSAAKALKP KFNVLSKHVA THTGFEVPHV EMKHLILGAL IMKSLGSLLF VFGSSLGAII LVIHQAIATP
101: ILYDFYNYDV DKKEFAQLLV KFTQSLALLG ALFFFIGMKN STKRSSHPKK KAPKTKTG
101: ILYDFYNYDV DKKEFAQLLV KFTQSLALLG ALFFFIGMKN STKRSSHPKK KAPKTKTG
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.