Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- golgi 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32166 | Soybean | endoplasmic reticulum | 49.57 | 73.08 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 48.7 | 70.89 |
| KRH67349 | Soybean | plasma membrane | 48.26 | 70.7 |
| KRH19536 | Soybean | endoplasmic reticulum | 47.83 | 70.51 |
| KRG95647 | Soybean | plasma membrane | 47.83 | 70.06 |
| CDY12466 | Canola | endoplasmic reticulum | 47.83 | 69.62 |
| CDY47153 | Canola | endoplasmic reticulum | 47.83 | 69.62 |
| Os03t0149200-01 | Rice | extracellular | 47.39 | 69.43 |
| Bra039861.1-P | Field mustard | plasma membrane | 46.96 | 68.35 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 46.52 | 68.15 |
| Solyc09g089670.2.1 | Tomato | extracellular, plasma membrane, vacuole | 47.39 | 67.7 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 46.09 | 67.52 |
| AT4G14420.1 | Thale cress | plasma membrane | 46.09 | 67.09 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 45.65 | 66.88 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 45.65 | 66.88 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 45.22 | 66.67 |
| CDY12771 | Canola | extracellular | 45.22 | 66.67 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 45.22 | 66.24 |
| Bra041032.1-P | Field mustard | extracellular | 44.78 | 66.03 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 44.35 | 65.38 |
| CDY49421 | Canola | extracellular | 44.35 | 65.38 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 44.35 | 64.97 |
| VIT_05s0049g00200.t01 | Wine grape | extracellular | 44.35 | 64.97 |
| EER92848 | Sorghum | extracellular | 43.91 | 64.33 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 45.65 | 64.02 |
| Solyc03g005470.2.1 | Tomato | plastid | 43.91 | 63.92 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 43.48 | 63.29 |
| OQU81217 | Sorghum | extracellular | 42.61 | 62.42 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 29.13 | 62.04 |
| Os04t0181100-01 | Rice | plasma membrane | 42.17 | 61.78 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 41.74 | 61.15 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 41.3 | 60.51 |
| Os10t0445500-01 | Rice | plasma membrane | 41.3 | 60.13 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 40.87 | 59.87 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 41.3 | 59.38 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 31.3 | 58.06 |
| PGSC0003DMT400044245 | Potato | cytosol | 40.87 | 53.11 |
| PGSC0003DMT400034860 | Potato | plastid | 40.43 | 50.54 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 40.87 | 38.84 |
Protein Annotations
| EntrezGene:100245894 | wikigene:100245894 | MapMan:35.2 | ProteinID:CCB48526 | ProteinID:CCB48526.1 | UniProt:F6H8I3 |
| EMBL:FN595496 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:HR_lesion | EntrezGene:LOC100245894 |
| wikigene:LOC100245894 | PFAM:PF05514 | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF1 | TIGR:TC53333 | TIGR:TC67269 |
| TMHMM:TMhelix | UniParc:UPI0001983437 | ArrayExpress:VIT_05s0049g00210 | EnsemblPlantsGene:VIT_05s0049g00210 | EnsemblPlants:VIT_05s0049g00210.t01 | RefSeq:XP_002284580 |
| RefSeq:XP_002284580.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:7315631..7319091
Molecular Weight (calculated)
25488.3 Da
IEP (calculated)
10.805
GRAVY (calculated)
0.224
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDADVVGGT RGFLGRSGLF KPVRHSRNSE VGSAGFRSFY TYIASPVLHL RERGRRQRRD SKAFHQLSCV RTSMAFVSFV GRVLFASVFI LSAWQEFNEF
101: GVDGGPAVES LAPKLDVFSK HVSANVGVQV PEVEIKNLVA ASIALKGLGG LLFIFGSSLG AHLLLLHQAI VIPILYDFYN YDVDKKEFVV LFLKFTQNLA
201: LFGALLFFIG MKNSMPRRQL KKKAPKTKTV
101: GVDGGPAVES LAPKLDVFSK HVSANVGVQV PEVEIKNLVA ASIALKGLGG LLFIFGSSLG AHLLLLHQAI VIPILYDFYN YDVDKKEFVV LFLKFTQNLA
201: LFGALLFFIG MKNSMPRRQL KKKAPKTKTV
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.