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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 2
  • extracellular 2
  • golgi 1
  • plasma membrane 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:plastid, secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d001820_P001
Zm00001d013937_P001
Zm00001d017390_P001
Zm00001d017768_P006
Zm00001d020667_P001
Zm00001d025939_P003
Zm00001d032576_P001
Zm00001d036342_P001
Zm00001d038964_P001
Zm00001d049553_P001
Zm00001d051288_P001
Zm00001d051562_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04340.1 Zm00001d001820_P001 AT1G03630.1 21798944
AT1G04340.1 Zm00001d013937_P001 AT1G03630.1 21798944
AT1G04340.1 Zm00001d032576_P001 AT1G03630.1 21798944
AT1G04340.1 Zm00001d017768_P006 AT3G50910.1 21798944
AT1G04340.1 Zm00001d020667_P001 AT3G50910.1 21798944
AT1G04340.1 Zm00001d038964_P001 AT3G50910.1 21798944
AT1G04340.1 Zm00001d051562_P001 AT3G50910.1 21798944
AT5G43460.1 Zm00001d017390_P001 AT3G60600.1 21798944
AT5G43460.1 Zm00001d025939_P003 AT3G60600.1 21798944
AT5G43460.1 Zm00001d036342_P001 AT3G60600.1 21798944
AT5G43460.1 Zm00001d049553_P001 AT3G60600.1 21798944
AT5G43460.1 Zm00001d051288_P001 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d032483_P001 Maize endoplasmic reticulum, extracellular, vacuole 98.15 85.48
Zm00001d018662_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 88.89 60.0
Zm00001d027680_P003 Maize endoplasmic reticulum, extracellular, plasma membrane 90.74 59.76
EER92848 Sorghum extracellular 86.11 59.24
Zm00001d048402_P001 Maize extracellular, golgi, plasma membrane 84.26 57.96
Os03t0149200-01 Rice extracellular 78.7 54.14
TraesCS4D01G312900.1 Wheat extracellular 76.85 52.87
HORVU4Hr1G080140.1 Barley extracellular 75.93 52.23
TraesCS4A01G415500.1 Wheat extracellular 75.93 52.23
TraesCS4B01G316300.1 Wheat extracellular 75.0 51.59
GSMUA_Achr11P... Banana endoplasmic reticulum, extracellular, plasma membrane 72.22 49.68
GSMUA_Achr1P01370_001 Banana extracellular 70.37 48.72
GSMUA_Achr8P14320_001 Banana plasma membrane 69.44 47.47
GSMUA_Achr4P26720_001 Banana extracellular 68.52 47.44
CDY12466 Canola endoplasmic reticulum 59.26 40.51
CDY47153 Canola endoplasmic reticulum 59.26 40.51
Bra041032.1-P Field mustard extracellular 58.33 40.38
KRH67349 Soybean plasma membrane 58.33 40.13
Bra039861.1-P Field mustard plasma membrane 58.33 39.87
CDY12771 Canola extracellular 57.41 39.74
CDY49421 Canola extracellular 57.41 39.74
KRH32166 Soybean endoplasmic reticulum 57.41 39.74
KRG95647 Soybean plasma membrane 57.41 39.49
VIT_05s0049g00200.t01 Wine grape extracellular 57.41 39.49
AT4G14420.1 Thale cress plasma membrane 57.41 39.24
KRH19536 Soybean endoplasmic reticulum 56.48 39.1
Solyc09g089670.2.1 Tomato extracellular, plasma membrane, vacuole 57.41 38.51
Solyc03g005470.2.1 Tomato plastid 55.56 37.97
CDY59304 Canola plasma membrane 54.63 37.58
Bra030565.1-P Field mustard plasma membrane 56.48 36.97
CDY15499 Canola plasma membrane 56.48 36.97
AT5G43460.1 Thale cress extracellular 51.85 36.36
Bra027498.1-P Field mustard plasma membrane 52.78 36.31
CDY32939 Canola plasma membrane 52.78 36.31
CDX86640 Canola extracellular, plasma membrane, vacuole 54.63 35.98
CDY60669 Canola extracellular, plasma membrane, vacuole 53.7 35.8
Bra015305.1-P Field mustard extracellular, plasma membrane, vacuole 53.7 35.8
CDY18220 Canola extracellular, plasma membrane, vacuole 53.7 35.8
KRG92302 Soybean extracellular 51.85 35.67
AT1G04340.1 Thale cress plasma membrane 51.85 35.22
KRH34500 Soybean extracellular 50.93 35.03
PGSC0003DMT400044245 Potato cytosol 56.48 34.46
KRG90387 Soybean extracellular 49.07 33.76
KRH31721 Soybean endoplasmic reticulum 48.15 33.12
PGSC0003DMT400034860 Potato plastid 55.56 32.61
Solyc06g053660.2.1 Tomato plasma membrane 44.44 30.57
KRH73866 Soybean plastid 40.74 29.53
VIT_05s0049g00210.t01 Wine grape plastid 62.04 29.13
Zm00001d025020_P001 Maize extracellular, golgi, plasma membrane 64.81 28.93
CDY10063 Canola plasma membrane 48.15 28.73
PGSC0003DMT400042097 Potato cytosol 45.37 25.13
Protein Annotations
EnsemblPlants:Zm00001d032568_P001EnsemblPlants:Zm00001d032568_T001EnsemblPlantsGene:Zm00001d032568GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:HR_lesionPANTHER:PTHR31474PANTHER:PTHR31474:SF1PFAM:PF05514ProteinID:ONM05408.1SEG:seg
TMHMM:TMhelixUniParc:UPI0004DEC15FUniProt:A0A1D6KRS8MapMan:35.2::
Description
HR-like lesion-inducing protein-related
Coordinates
chr1:-:230778341..230778667
Molecular Weight (calculated)
11659.7 Da
IEP (calculated)
6.967
GRAVY (calculated)
0.852
Length
108 amino acids
Sequence
(BLAST)
001: MPAGPLALEP LAFSTHLGVA VPHIELKHVV AATIGLKGLG SLLFILSSSL GAYLLLLYLA LITPIIHDFY NYDMEKTEFA GLFAKFTQDL ALIGALLFFL
101: GMKNSIPK
Best Arabidopsis Sequence Match ( AT1G04340.1 )
(BLAST)
001: MGFFSFLGRV LFASLFILSA WQMFNDFGTD GGPAAKELAP KLDLTKAHLS SILGVSLPNL EVKQVVWAIV ALKGLGGLLF VIGNIFGAYL LAVYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA
Arabidopsis Description
At1g04340/F19P19_23 [Source:UniProtKB/TrEMBL;Acc:O22690]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.